Evidence map›Paper›PMID 22899653›Full record

SynthesisHuman molecular genetics2012

Influence of common genetic variation on lung cancer risk: meta-analysis of 14 900 cases and 29 485 controls.

Maria N Timofeeva, Rayjean J Hung, Thorunn Rafnar, David C Christiani, John K Field, Heike Bickeböller, Angela Risch, James D McKay, Yufei Wang, Juncheng Dai and 53 more

Open access · hybridAbstract readMeta-Analysis
In one paragraph

Synthesis in Human molecular genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 152 papers, 33 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
152citing papers in PubMed, 33 pooled it
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

152 citing papers in PubMed, 33 syntheses or guidelines pooled it, 238 citations in OpenAlex.

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92 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

63 authors at 20 institutions in 16 countries.

Maria N TimofeevaInternational Agency for Research on Cancer, Lyon, France.
Rayjean J Hung
Thorunn Rafnar
David C Christiani
John K Field
Heike Bickeböller
Angela Risch
James D McKay
Yufei Wang
Juncheng Dai
Valerie Gaborieau
John McLaughlin
Darren Brenner
Steven A Narod
Neil E Caporaso
Demetrius Albanes
Michael Thun
Timothy Eisen
H-Erich Wichmann
Albert Rosenberger
Younghun Han
Wei Chen
Dakai Zhu
Margaret Spitz
Xifeng Wu
Mala Pande
Yang Zhao
David Zaridze
Neonilia Szeszenia-Dabrowska
Jolanta Lissowska
Peter Rudnai
Eleonora Fabianova
Dana Mates
Vladimir Bencko
Lenka Foretova
Vladimir Janout
Hans E Krokan
Maiken Elvestad Gabrielsen
Frank Skorpen
Lars Vatten
Inger Njølstad
Chu Chen
Gary Goodman
Mark Lathrop
Simone Benhamou
Tõnu Vooder
Kristjan Välk
Mari Nelis
Andres Metspalu
Olaide Raji
Ying Chen
John Gosney
Triantafillos Liloglou
Thomas Muley
Hendrik Dienemann
Gudmar Thorleifsson
Hongbing Shen
Kari Stefansson
Paul Brennan
Christopher I Amos
Richard Houlston
Maria Teresa Landi
Transdisciplinary Research in Cancer of the Lung (TRICL) Research Team
Centre international de recherche sur le cancer · FRdeCODE Genetics (Iceland) · ISLunenfeld-Tanenbaum Research Institute · CANorwegian University of Science and Technology · NORoy Castle Lung Cancer Foundation · GBFred Hutch Cancer Center · USGerman Center for Lung Research · DEHarvard University · USInstitute of Cancer Research · GBNanjing Medical University · CNNational Cancer Institute · USThe University of Texas MD Anderson Cancer Center · USUniversity of Göttingen · DEUniversity of Liverpool · GBAmerican Cancer Society · USBaylor College of Medicine · USCambridge University Hospitals NHS Foundation Trust · GBCharles University · CZCompetence Centre on Health Technologies (Estonia) · EEDartmouth College · US

Funding

UNIVERSITY OF TEXAS--SPORE IN LUNG CANCERP50CA070907 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HEYMACH, JOHN V. · 1996 to 2024
$57.4M
JH/CIDR Genotyping for Genome-Wide Association StudiesU01HG004438 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2007 to 2011
$24.2M
THE CAROTENE AND RETINOL EFFICACY TRIAL (CARET)U01CA063673 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GOODMAN, GARY E · 1994 to 2006
$13.0M
Translational studies of Hsp90 inhibitors in NSCLCP50CA090578 · NCI · DANA-FARBER CANCER INST · PI MEYERSON, MATTHEW L. · 2008 to 2012
$11.4M
Transdisciplinary Research in Cancer of the Lung (TRICL)U19CA148127 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI AMOS, CHRISTOPHER I., LE MARCHAND, LOIC · 2010 to 2014
$10.9M
PROSTATE, LUNG, COLORECTAL, &OVARIAN CANCER SCREENINGN01CN025476 · CN · WESTAT, INC. · PI O'BRIEN, BARBARA B · 1992 to 2000
$7.9M
Genome Wide Association Coordinating CenterU01HG004446 · NHGRI · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2007 to 2011
$6.6M
Molecular and Genetic Analysis of Lung Cancer SurvivalR01CA092824 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI CHRISTIANI, DAVID C · 2002 to 2013
$5.9M
ECOGENETIC STUDY OF LUNG CANCER IN MINORITIESR01CA055769 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI SPITZ, MARGARET R · 1991 to 2008
$5.3M
SPORE in Lung CancerP20CA090578 · NCI · DANA-FARBER CANCER INSTITUTE · PI JOHNSON, BRUCE E. · 2003 to 2007
$5.1M
GENETIC SUSCEPTIBILITY TO LUNG CANCERR01CA074386 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI CHRISTIANI, DAVID C · 1997 to 2008
$4.8M
GENETICS OF TOBACCO AND ALCOHOL RELATED CANCERSR01CA092039 · NCI · INTERNATIONAL AGENCY FOR RES ON CANCER · PI BRENNAN, PAUL JOSEPH · 2003 to 2010
$3.6M
Cancer Research UK C1298/A8362Cancer Research UK C1298/A8780CCR NIH HHS N01-RC-37004CCR NIH HHS N01-RC-45035Intramural NIH HHSNCI NIH HHS 5R01CA055769NCI NIH HHS 5R01CA121197NCI NIH HHS 5R01CA127219NCI NIH HHS 5R01CA133996NCI NIH HHS CA074386NCI NIH HHS CA090578NCI NIH HHS CA092824NCI NIH HHS N01 CN025404NCI NIH HHS N01 CN025476NCI NIH HHS N01 CN025511NCI NIH HHS N01 CN025512NCI NIH HHS N01 CN025513NCI NIH HHS N01 CN025514NCI NIH HHS N01 CN025515NCI NIH HHS N01 CN025516NCI NIH HHS N01 CN025518NCI NIH HHS N01 CN025522NCI NIH HHS N01 CN025524NCI NIH HHS N01 CN075022NCI NIH HHS N01-CN-25404NCI NIH HHS N01-CN-25476NCI NIH HHS N01-CN-25511NCI NIH HHS N01-CN-25512NCI NIH HHS N01-CN-25513NCI NIH HHS N01-CN-25514NCI NIH HHS N01-CN-25515NCI NIH HHS N01-CN-25516NCI NIH HHS N01-CN-25518NCI NIH HHS N01-CN-25522NCI NIH HHS N01-CN-25524NCI NIH HHS N01-CN-45165NCI NIH HHS N01-CN-75022NCI NIH HHS P20 CA090578NCI NIH HHS P50 CA070907NCI NIH HHS P50 CA090578NCI NIH HHS P50 CA70907NCI NIH HHS R01 CA055769NCI NIH HHS R01 CA074386NCI NIH HHS R01 CA092039NCI NIH HHS R01 CA092824NCI NIH HHS R01 CA111703NCI NIH HHS R01 CA121197NCI NIH HHS R01CA121197NCI NIH HHS R01 CA127219NCI NIH HHS R01 CA133996NCI NIH HHS R01 CA55769NCI NIH HHS U01 CA063673NCI NIH HHS U01 CA63673NCI NIH HHS U19 CA148127NCI NIH HHS U19CA148127NHGRI NIH HHS HG-06033-01NHGRI NIH HHS HHSN268200782096CNHGRI NIH HHS U01 HG004438NHGRI NIH HHS U01HG004438NHGRI NIH HHS U01 HG004446NHLBI NIH HHS R01HL091172-01
6 · The paper itself

Abstract

Recent genome-wide association studies (GWASs) have identified common genetic variants at 5p15.33, 6p21-6p22 and 15q25.1 associated with lung cancer risk. Several other genetic regions including variants of CHEK2 (22q12), TP53BP1 (15q15) and RAD52 (12p13) have been demonstrated to influence lung cancer risk in candidate- or pathway-based analyses. To identify novel risk variants for lung cancer, we performed a meta-analysis of 16 GWASs, totaling 14 900 cases and 29 485 controls of European descent. Our data provided increased support for previously identified risk loci at 5p15 (P = 7.2 × 10(-16)), 6p21 (P = 2.3 × 10(-14)) and 15q25 (P = 2.2 × 10(-63)). Furthermore, we demonstrated histology-specific effects for 5p15, 6p21 and 12p13 loci but not for the 15q25 region. Subgroup analysis also identified a novel disease locus for squamous cell carcinoma at 9p21 (CDKN2A/p16(INK4A)/p14(ARF)/CDKN2B/p15(INK4B)/ANRIL; rs1333040, P = 3.0 × 10(-7)) which was replicated in a series of 5415 Han Chinese (P = 0.03; combined analysis, P = 2.3 × 10(-8)). This large analysis provides additional evidence for the role of inherited genetic susceptibility to lung cancer and insight into biological differences in the development of the different histological types of lung cancer.

Indexed as

Genetic VariationGenome-Wide Association StudyAsian PeopleCase-Control StudiesHumansLung NeoplasmsPolymorphism, Single NucleotideRiskWhite People

Identifiers

PMID22899653
PMCPMC3607485
OpenAlexW2147615363

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.