Evidence map›Paper›PMID 22898984›Full record

ArticleRNA (New York, N.Y.)2012

Lin28-mediated control of let-7 microRNA expression by alternative TUTases Zcchc11 (TUT4) and Zcchc6 (TUT7).

James E Thornton, Hao-Ming Chang, Elena Piskounova, Richard I Gregory

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 145 papers.

0numbers the graph read from it
0cells of the map it votes in
145citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

145 citing papers in PubMed, 201 citations in OpenAlex.

  1. Article
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  5. The biogenesis and regulation of animal microRNAs.Nature reviews. Molecular cell biology · 2025
    Review
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  8. Article
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  12. Review
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  16. ISG20L2: an RNA nuclease regulating T cell activation.Cellular and molecular life sciences : CMLS · 2023
    Article
  17. Article
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  19. Review
  20. Article

85 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

James E ThorntonStem Cell Program, Boston Children's Hospital, Boston, Massachusetts 02115, USA.
Hao-Ming Chang
Elena Piskounova
Richard I Gregory
Boston Children's Hospital · US

Funding

Regulation of microRNA Biogenesis in Stem CellsR01GM086386 · NIGMS · BOSTON CHILDREN'S HOSPITAL · PI GREGORY, RICHARD I. · 2009 to 2018
$3.1M
NIGMS NIH HHS R01 GM086386NIGMS NIH HHS R01GM086386
6 · The paper itself

Abstract

The pluripotency factor Lin28 recruits a 3' terminal uridylyl transferase (TUTase) to selectively block let-7 microRNA biogenesis in undifferentiated cells. Zcchc11 (TUTase4/TUT4) was previously identified as an enzyme responsible for Lin28-mediated pre-let-7 uridylation and control of let-7 expression. Here we investigate the protein and RNA determinants for this interaction. Biochemical dissection and reconstitution assays reveal the TUTase domains necessary and sufficient for Lin28-enhanced pre-let-7 uridylation. A single C2H2-type zinc finger domain of Zcchc11 was found to be responsible for the functional interaction with Lin28. We identify Zcchc6 (TUTase7) as an alternative TUTase that functions with Lin28 in vitro, and accordingly, we find Zcchc11 and Zcchc6 redundantly control let-7 biogenesis in embryonic stem cells. Our study indicates that Lin28 uses two different TUTases to control let-7 expression and has important implications for stem cell biology as well as cancer.

Indexed as

Amino Acid SequenceAnimalsCells, CulturedDNA-Binding ProteinsGene Expression RegulationHEK293 CellsHumansMiceMicroRNAsModels, BiologicalMolecular Sequence DataRNA-Binding ProteinsRNA NucleotidyltransferasesRNA, Small InterferingSequence Homology, Amino AcidTranscription FactorsDNA-Binding ProteinsLin28A protein, humanMicroRNAsmirnlet7 microRNA, humanRNA-Binding ProteinsRNA NucleotidyltransferasesRNA, Small InterferingTranscription FactorsTUT4 protein, humanTUT7 protein, humanUTP-RNA uridylyltransferase

Identifiers

PMID22898984
PMCPMC3446710
OpenAlexW2096335988

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.