Evidence map›Paper›PMID 22898822›Full record

ArticleThe Journal of biological chemistry2012

Crystal structure of the VgrG1 actin cross-linking domain of the Vibrio cholerae type VI secretion system.

Eric Durand, Estelle Derrez, Gilles Audoly, Silvia Spinelli, Miguel Ortiz-Lombardia, Didier Raoult, Eric Cascales, Christian Cambillau

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 68 citations in OpenAlex.

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  6. Genomic signatures of resistance and adaptability in Aeromonas and Pseudomonas from a Brazilian Hope Spot.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
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  7. Deciphering theJournal of bacteriology · 2025
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  8. Review
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  13. International journal of molecular sciences · 2021
    Article
  14. Endogenous membrane stress induces T6SS activity inProceedings of the National Academy of Sciences of the United States of America · 2021
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  16. Article
  17. An Overview of Anti-Eukaryotic T6SS Effectors.Frontiers in cellular and infection microbiology · 2020
    Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Eric DurandAix-Marseille Université, Architecture et Fonction des Macromolécules Biologiques, Marseille Cedex 09, France.
Estelle Derrez
Gilles Audoly
Silvia Spinelli
Miguel Ortiz-Lombardia
Didier Raoult
Eric Cascales
Christian Cambillau
Aix-Marseille Université · FRCentre National de la Recherche Scientifique · FRArchitecture et Fonction des Macromolécules Biologiques · FRUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio cholerae is the cause of the diarrheal disease cholera. V. cholerae produces RtxA, a large toxin of the MARTX family, which is targeted to the host cell cytosol, where its actin cross-linking domain (ACD) cross-links G-actin, leading to F-actin depolymerization, cytoskeleton rearrangements, and cell rounding. These effects on the cytoskeleton prevent phagocytosis and bacterial engulfment by macrophages, thus preventing V. cholerae clearance from the gut. The V. cholerae Type VI secretion-associated VgrG1 protein also contains a C-terminal ACD, which shares 61% identity with MARTX ACD and has been shown to covalently cross-link G-actin. Here, we purified the VgrG1 C-terminal domain and determined its crystal structure. The VgrG1 ACD exhibits a V-shaped three-dimensional structure, formed of 12 β-strands and nine α-helices. Its active site comprises five residues that are conserved in MARTX ACD toxin, within a conserved area of ∼10 Å radius. We showed that less than 100 ACD molecules are sufficient to depolymerize the actin filaments of a fibroblast cell in vivo. Mutagenesis studies confirmed that Glu-16 is critical for the F-actin depolymerization function. Co-crystals with divalent cations and ATP reveal the molecular mechanism of the MARTX/VgrG toxins and offer perspectives for their possible inhibition.

Indexed as

Protein Structure, TertiaryActinsAdenosine DiphosphateAdenosine TriphosphateAnimalsBacterial ProteinsBinding SitesBlotting, WesternCell LineCrystallography, X-RayGlutamic AcidHumansMagnesiumManganeseModels, MolecularMutationActinsAdenosine DiphosphateAdenosine TriphosphateBacterial ProteinsGlutamic AcidMagnesiumManganese

Identifiers

PMID22898822
PMCPMC3488088
OpenAlexW2154845344

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.