Evidence map›Paper›PMID 22896740›Full record

ArticleAnnals of the rheumatic diseases2013

Confirmation of TNIP1 but not RHOB and PSORS1C1 as systemic sclerosis risk factors in a large independent replication study.

Lara Bossini-Castillo, Jose Ezequiel Martin, Jasper Broen, Carmen P Simeon, Lorenzo Beretta, Olga Y Gorlova, Madelon C Vonk, Norberto Ortego-Centeno, Gerard Espinosa, Patricia Carreira and 28 more

Open access · greenAbstract readMulticenter Study
In one paragraph

Article in Annals of the rheumatic diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it, 65 citations in OpenAlex.

  1. Pooled it
  2. Association ofInternational journal of molecular sciences · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. The Immunogenetics of Systemic Sclerosis.Advances in experimental medicine and biology · 2022
    Article
  7. [Application of lymphocytes test in peripheral blood of patients with systemic sclerosis during the treatment].Beijing da xue xue bao. Yi xue ban = Journal of Peking University. Health sciences · 2021
    Article
  8. Updates on genetics in systemic sclerosis.Inflammation and regeneration · 2021
    Review
  9. Genetics of systemic sclerosis.Journal of scleroderma and related disorders · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Journal of clinical medicine · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors at 20 institutions in 7 countries.

Lara Bossini-CastilloDepartment of Immunology, Instituto de Parasitología y Biomedicina López-Neyra, IPBLN-CSIC, Consejo Superior de Investigaciones Científicas, Parque Tecnológico Ciencias de la Salud, Avenida del Conocimiento s/n 18100-Armilla, Granada, Spain. larabc@ipb.csic.es
Jose Ezequiel Martin
Jasper Broen
Carmen P Simeon
Lorenzo Beretta
Olga Y Gorlova
Madelon C Vonk
Norberto Ortego-Centeno
Gerard Espinosa
Patricia Carreira
Paloma García de la Peña
Natividad Oreiro
José Andrés Román-Ivorra
María Jesús Castillo
Miguel A González-Gay
Luis Sáez-Comet
Ivan Castellví
Annemie J Schuerwegh
Alexandre E Voskuyl
Anna-Maria Hoffmann-Vold
Roger Hesselstrand
Annika Nordin
Claudio Lunardi
Raffaella Scorza
Jacob M van Laar
Paul G Shiels
Ariane Herrick
Jane Worthington
Carmen Fonseca
Christopher Denton
Filemon K Tan
Frank C Arnett
Shervin Assassi
Bobby P Koeleman
Maureen D Mayes
Timothy R D J Radstake
Javier Martin
Spanish Scleroderma Group
The University of Texas Health Science Center at Houston · USInstituto de Parasitología y Biomedicina "López - Neyra" · ESManchester Academic Health Science Centre · GBRadboud University Medical Center · NLUniversity Medical Center Utrecht · NLUniversity of Milan · ITAmsterdam UMC Location VUmc · NLConsejo Superior de Investigaciones Científicas · ESFundación Marques de Valdecilla · ESHospital Clínic de Barcelona · ESHospital de Sant Pau · ESHospital Universitari i Politècnic La Fe · ESHospital Universitario 12 De Octubre · ESHospital Universitario HM Sanchinarro · ESHospital Universitario Miguel Servet · ESHospital Universitario Virgen del Rocío · ESHospital Virgen del Valle · ESInstituto de Investigación Biomédica de A Coruña · ESKarolinska Institutet · SELeiden University Medical Center · NL

Funding

Role of TGF-beta and CTGF Signaling Transgenic Mouse Models of SclerodermaP50AR054144 · NIAMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI TAN, FILEMON K. · 2006 to 2010
$7.7M
Two-Stage Genome-Wide Association Study in Systemic SclerosisR01AR055258 · NIAMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MAYES, MAUREEN MAUREEN · 2008 to 2012
$5.9M
SCLERODERMA FAMILY REGISTRY AND DNA REPOSITORY-264002251-264002251-264002251N01AR002251 · NIAMS · WAYNE STATE UNIVERSITY · PI MAYES, MAUREEN · 2000 to 2006
$659k
Arthritis Research UK 17552NIAMS NIH HHS 1P50AR054144NIAMS NIH HHS N01 AR002251NIAMS NIH HHS N01-AR-0-2251NIAMS NIH HHS P50 AR054144NIAMS NIH HHS R01 AR055258NIAMS NIH HHS R01-AR055258
6 · The paper itself

Abstract

introductionA recent genome-wide association study in European systemic sclerosis (SSc) patients identified three loci (PSORS1C1, TNIP1 and RHOB) as novel genetic risk factors for the disease. The aim of this study was to replicate the previously mentioned findings in a large multicentre independent SSc cohort of Caucasian ancestry.

methods4389 SSc patients and 7611 healthy controls from different European countries and the USA were included in the study. Six single nucleotide polymorphisms (SNP): rs342070, rs13021401 (RHOB), rs2233287, rs4958881, rs3792783 (TNIP1) and rs3130573 (PSORS1C1) were analysed. Overall significance was calculated by pooled analysis of all the cohorts. Haplotype analyses and conditional logistic regression analyses were carried out to explore further the genetic structure of the tested loci.

resultsPooled analyses of all the analysed SNPs in TNIP1 revealed significant association with the whole disease (rs2233287 p(MH)=1.94×10(-4), OR 1.19; rs4958881 p(MH)=3.26×10(-5), OR 1.19; rs3792783 p(MH)=2.16×10(-4), OR 1.19). These associations were maintained in all the subgroups considered. PSORS1C1 comparison showed association with the complete set of patients and all the subsets except for the anti-centromere-positive patients. However, the association was dependent on different HLA class II alleles. The variants in the RHOB gene were not associated with SSc or any of its subsets.

conclusionsThese data confirmed the influence of TNIP1 on an increased susceptibility to SSc and reinforced this locus as a common autoimmunity risk factor.

Indexed as

DNA-Binding ProteinsEuropeGenetic Predisposition to DiseaseGenome-Wide Association StudyHaplotypesHumansPolymorphism, Single NucleotideProteinsrhoB GTP-Binding ProteinRisk FactorsScleroderma, SystemicWhite PeopleDNA-Binding ProteinsProteinsPSORS1C1 protein, humanrhoB GTP-Binding ProteinTNIP1 protein, human

Identifiers

PMID22896740
PMCPMC3887516
OpenAlexW2104914251

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.