Evidence map›Paper›PMID 22896699›Full record

ArticleThe Journal of biological chemistry2012

Polycomb antagonizes p300/CREB-binding protein-associated factor to silence FOXP3 in a Kruppel-like factor-dependent manner.

Yuning Xiong, Sahil Khanna, Adrienne L Grzenda, Olga F Sarmento, Phyllis A Svingen, Gwen A Lomberk, Raul A Urrutia, William A Faubion

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
  2. Review
  3. Epigenetics of Inflammatory Bowel Diseases.The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology · 2023
    Article
  4. Article
  5. Review
  6. Peritoneal Modulators of EZH2-miR-155 Cross-Talk in Endometriosis.International journal of molecular sciences · 2021
    Article
  7. Article
  8. Review
  9. KLF10 Deficiency in CD4Cell reports · 2020
    Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Yuning XiongChromatin Dynamics and Epigenetics Laboratory, Mayo Clinic, Rochester, Minnesota 55905, USA.
Sahil Khanna
Adrienne L Grzenda
Olga F Sarmento
Phyllis A Svingen
Gwen A Lomberk
Raul A Urrutia
William A Faubion
Laboratory of Molecular Genetics · PLMayo Clinic · USWinnMed · US

Funding

ZINC FINGER GENES AND PANCREATIC CELL GROWTHR01DK052913 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI LOMBERK, GWEN, URRUTIA, RAUL A. · 1998 to 2023
$7.0M
KLF10 regulates colitis through mediating TGFb induction of FOXP3 in Treg cells.R01AI089714 · NIAID · MAYO CLINIC ROCHESTER · PI FAUBION, WILLIAM A · 2011 to 2025
$6.3M
Tumor Microenvironment/Angiogenesis Training GrantT32CA148073 · NCI · MAYO CLINIC ROCHESTER · PI MC NIVEN, MARK A. · 2010 to 2014
$1.2M
KLF10 regulates colitis through mediating TGFb induction of FOXP3 in Treg cells.R56AI089714 · NIAID · MAYO CLINIC ROCHESTER · PI FAUBION, WILLIAM A · 2010 to 2010
$394k
NCI NIH HHS T32 CA148073NIAID NIH HHS AI89714-R01NIAID NIH HHS R01 AI089714NIAID NIH HHS R56 AI089714NIDDK NIH HHS R01 DK052913
6 · The paper itself

Abstract

Inducible gene expression underlies the epigenetically inherited differentiation program of most immune cells. We report that the promoter of the FOXP3 gene possesses two distinct functional states: an "off state" mediated by the polycomb histone methyltransferase complex and a histone acetyltransferase-dependent "on state." Regulating these states is the presence of a Kruppel-like factor (KLF)-containing Polycomb response element. In the KLF10(-/-) mouse, the FOXP3 promoter is epigenetically silenced by EZH2 (Enhancer of Zeste 2)-mediated trimethylation of Histone 3 K27; thus, impaired FOXP3 induction and inappropriate adaptive T regulatory cell differentiation results in vitro and in vivo. The epigenetic transmittance of adaptive T regulatory cell deficiency is demonstrated throughout more than 40 generations of mice. These results provide insight into chromatin remodeling events key to phenotypic features of distinct T cell populations.

Indexed as

AnimalsChromatin Assembly and DisassemblyEarly Growth Response Transcription FactorsEnhancer of Zeste Homolog 2 ProteinForkhead Transcription FactorsGene SilencingKruppel-Like Transcription FactorsMaleMiceMice, Knockoutp300-CBP-Associated Factorp300-CBP Transcription FactorsPolycomb-Group ProteinsPolycomb Repressive Complex 2Response ElementsT-Lymphocytes, RegulatoryEarly Growth Response Transcription FactorsEnhancer of Zeste Homolog 2 ProteinEzh2 protein, mouseForkhead Transcription FactorsFoxp3 protein, mouseKLF10 protein, mouseKruppel-Like Transcription Factorsp300-CBP-Associated Factorp300-CBP Transcription FactorsPolycomb-Group ProteinsPolycomb Repressive Complex 2

Identifiers

PMID22896699
PMCPMC3464543
OpenAlexW1987076097

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.