Evidence map›Paper›PMID 22895339›Full record

ArticleNature2012

Passenger deletions generate therapeutic vulnerabilities in cancer.

Florian L Muller, Simona Colla, Elisa Aquilanti, Veronica E Manzo, Giannicola Genovese, Jaclyn Lee, Daniel Eisenson, Rujuta Narurkar, Pingna Deng, Luigi Nezi and 12 more

Erratum issuedAbstract read
In one paragraph

Article in Nature, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 232 papers.

0numbers the graph read from it
0cells of the map it votes in
232citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

232 citing papers in PubMed, 353 citations in OpenAlex.

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172 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 1 country.

Florian L MullerDepartment of Genomic Medicine, University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA.
Simona Colla
Elisa Aquilanti
Veronica E Manzo
Giannicola Genovese
Jaclyn Lee
Daniel Eisenson
Rujuta Narurkar
Pingna Deng
Luigi Nezi
Michelle A Lee
Baoli Hu
Jian Hu
Ergun Sahin
Derrick Ong
Eliot Fletcher-Sananikone
Dennis Ho
Lawrence Kwong
Cameron Brennan
Y Alan Wang
Lynda Chin
Ronald A DePinho
Dana-Farber Cancer Institute · USThe University of Texas MD Anderson Cancer Center · USMemorial Sloan Kettering Cancer Center · US

Funding

Transgenic Mouse and Biobank CoreP01CA095616 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DEPINHO, RONALD ANTHONY · 2003 to 2012
$20.3M
Tumor Cell Biology Training ProgramT32CA009361 · NCI · DANA-FARBER CANCER INSTITUTE · PI GRAY, NATHANAEL SCHIANDER · 1985 to 2015
$8.9M
Electro-optic adaptive eyeglass for correction of presbyopiaR01EY020641 · NEI · UNIVERSITY OF MISSOURI-ST. LOUIS · PI LI, GUOQIANG · 2010 to 2014
$1.7M
Howard Hughes Medical Institute 57006984NCI NIH HHS 3 P01 CA095616-08S1NCI NIH HHS P01 CA095616NCI NIH HHS P01CA95616NCI NIH HHS T32 CA009361NCI NIH HHS T32-CA009361NEI NIH HHS R01 EY020641
6 · The paper itself

Abstract

Inactivation of tumour-suppressor genes by homozygous deletion is a prototypic event in the cancer genome, yet such deletions often encompass neighbouring genes. We propose that homozygous deletions in such passenger genes can expose cancer-specific therapeutic vulnerabilities when the collaterally deleted gene is a member of a functionally redundant family of genes carrying out an essential function. The glycolytic gene enolase 1 (ENO1) in the 1p36 locus is deleted in glioblastoma (GBM), which is tolerated by the expression of ENO2. Here we show that short-hairpin-RNA-mediated silencing of ENO2 selectively inhibits growth, survival and the tumorigenic potential of ENO1-deleted GBM cells, and that the enolase inhibitor phosphonoacetohydroxamate is selectively toxic to ENO1-deleted GBM cells relative to ENO1-intact GBM cells or normal astrocytes. The principle of collateral vulnerability should be applicable to other passenger-deleted genes encoding functionally redundant essential activities and provide an effective treatment strategy for cancers containing such genomic events.

Indexed as

AnimalsAntineoplastic AgentsBiomarkers, TumorBrain NeoplasmsCell Line, TumorCell ProliferationChromosomes, Human, Pair 1DNA-Binding ProteinsEnzyme InhibitorsGene Expression Regulation, NeoplasticGene Knockdown TechniquesGenes, EssentialGenes, Tumor SuppressorGlioblastomaHomozygoteHumansAntineoplastic AgentsBiomarkers, TumorDNA-Binding ProteinsENO1 protein, humanEnzyme InhibitorsHydroxamic AcidsPhosphonoacetic AcidphosphonoacetohydroxamatePhosphopyruvate HydrataseRNA, Small InterferingTumor Suppressor Proteins

Identifiers

PMID22895339
PMCPMC3712624
OpenAlexW1982318323

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.