Evidence map›Paper›PMID 22892111›Full record

ArticleVision research2012

The expression of whirlin and Cav1.3α₁ is mutually independent in photoreceptors.

Junhuang Zou, Amy Lee, Jun Yang

Abstract read
In one paragraph

Article in Vision research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Knockout of CaScientific reports · 2021
    Article
  2. Circadian regulation in the retina: From molecules to network.The European journal of neuroscience · 2020
    Review
  3. Review
  4. Article
  5. Expression of Cav1.3 calcium channel in the human and mouse colon: posttranscriptional inhibition by IFNγ.American journal of physiology. Gastrointestinal and liver physiology · 2017
    Article
  6. Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Junhuang ZouDepartment of Ophthalmology and Visual Sciences, John A. Moran Eye Center, University of Utah, Salt Lake City, UT 84132, United States.
Amy Lee
Jun Yang
University of Utah · USUniversity of Iowa · US

Funding

University of Utah, Core Vision Research GrantP30EY014800 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Jun Yang · 2005 to 2026
$14.6M
Regulation of auditory calcium channelsR01DC009433 · NIDCD · UNIVERSITY OF IOWA · PI LEE, AMY · 2009 to 2018
$3.6M
Formation and New Components of the Usher 2 Protein Complex in PhotoreceptorsR01EY020853 · NEI · UNIVERSITY OF UTAH · PI YANG, JUN · 2011 to 2015
$1.6M
Regulation of L-type calcium channels by CaBP4R01EY020850 · NEI · UNIVERSITY OF WASHINGTON · PI HAESELEER, FRANCOISE J · 2010 to 2014
$1.6M
Modulation of Cav 1.3 L-type Ca2+ channels by PDZ-protein interactionsR01HL087120 · NHLBI · UNIVERSITY OF IOWA · PI LEE, AMY · 2009 to 2012
$1.4M
Regulation of auditory calcium channelsR55DC009433 · NIDCD · EMORY UNIVERSITY · PI LEE, AMY · 2008 to 2008
$100k
HYPOXIA-INDUCED GROWTH FACTOR RELEASE FROM PAECF33HL008712 · NHLBI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI PHILIPS, JOSEPH B · 1992 to 1992
–
NEI NIH HHS EY014800NEI NIH HHS EY020850NEI NIH HHS EY020853NEI NIH HHS P30 EY014800NEI NIH HHS R01 EY020850NEI NIH HHS R01 EY020853NHLBI NIH HHS HL08712NHLBI NIH HHS R01 HL087120NIDCD NIH HHS DC009433NIDCD NIH HHS R01 DC009433NIDCD NIH HHS R55 DC009433
6 · The paper itself

Abstract

Whirlin is a gene responsible for Usher syndrome type II (USH2) and congenital deafness. In photoreceptors, it organizes a protein complex through binding to proteins encoded by other USH2 genes, usherin (USH2A) and G-protein-coupled receptor 98 (GPR98). Recently, Ca(v)1.3α(1) (α(1D)) has been discovered to interact with whirlin in vitro and these two proteins are localized to the same subcellular compartments in photoreceptors. Accordingly, it is proposed that Ca(v)1.3α(1) is in the USH2 protein complex and that the USH2 protein complex is involved in regulating Ca(2+) in photoreceptors. To test this hypothesis, we investigated the interdependence of Ca(v)1.3α(1) and whirlin expression in photoreceptors. We found that lack of Ca(v)1.3α(1) did not change the whirlin distribution or expression level in photoreceptors. In the retina, several Ca(v)1.3α(1) splice variants were found at the RNA level. Among them, the whirlin-interacting Ca(v)1.3α(1) long variant had no change in its protein expression level in the absence of whirlin. The localization of Ca(v)1.3α(1) in photoreceptors, published previously, cannot be confirmed. Therefore, the mutual independence of whirlin and Ca(v)1.3α(1) expressions in photoreceptors suggests that Ca(v)1.3α(1) may not be a key member of the USH2 protein complex at the periciliary membrane complex.

Indexed as

AnimalsBlotting, WesternCalcium Channels, L-TypeMembrane ProteinsMiceMice, KnockoutPhotoreceptor Cells, VertebrateCacna1d protein, mouseCalcium Channels, L-TypeMembrane ProteinsWHRN protein, human

Identifiers

PMID22892111
PMCPMC3514573
OpenAlexW1970487091

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.