Evidence map›Paper›PMID 22890249›Full record

ArticleCritical care medicine2012

Association of cystic fibrosis transmembrane conductance regulator gene variants with acute lung injury in African American children with pneumonia*.

Julie M Baughn, Michael W Quasney, Pippa Simpson, Daniel Merchant, Shun-Hwa Li, Hara Levy, Mary K Dahmer

Open access · greenAbstract read
In one paragraph

Article in Critical care medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Acquired cystic fibrosis transmembrane conductance regulator dysfunction.Pflugers Archiv : European journal of physiology · 2025
    Review
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Julie M BaughnSection of Pulmonary and Sleep Medicine, Medical College of Wisconsin, Milwaukee, WI, USA.
Michael W Quasney
Pippa Simpson
Daniel Merchant
Shun-Hwa Li
Hara Levy
Mary K Dahmer
Southwestern Educational Society · PRMedical College of Wisconsin · US

Funding

Integration of Genomics with Genetics - Molecular Phenotypes for CF Lung DiseaseDP2OD007031 · OD · MEDICAL COLLEGE OF WISCONSIN · PI LEVY, HARA · 2010 to 2010
$2.2M
IL-1 Family Gene Polymorphisms and Susceptibility to P. aeruginosa in CF PatientsR21HL102523 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI LEVY, HARA · 2010 to 2011
$413k
Genetic Polymorphisms in Pediatric Lung InjuryR21HD047670 · NICHD · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI QUASNEY, MICHAEL W · 2004 to 2005
$402k
NHLBI NIH HHS R21 HL102523NICHD NIH HHS R21 HD047670NICHD NIH HHS R21 HD47670NIH HHS DP2 OD007031
6 · The paper itself

Abstract

objectivesThe cystic fibrosis transmembrane conductance regulator regulates fluid balance in alveolar epithelial cells and appears to modulate the inflammatory response. To determine whether more severe lung injury in children who develop community-acquired pneumonia is associated with variations known to affect function in the gene coding for cystic fibrosis transmembrane conductance regulator.

designA prospective cohort genetic association study of lung injury in children with community-acquired pneumonia.

settingThree major tertiary care children's hospitals. SUBJECTS: Caucasian and African American children with community-acquired pneumonia either evaluated in the emergency department or admitted to the hospital.

interventionsNone. MEASUREMENTS AND MAIN

resultsCaucasian and African American children with pneumonia were genotyped for the most common variants reported to affect cystic fibrosis transmembrane conductance regulator function, the p.508del mutation, the (TG)mTn variable repeat region, and the M470V polymorphism in the cystic fibrosis transmembrane conductance regulator gene. Genotypes and haplotypes were determined, and the association of high-risk alleles or high-risk haplotypes (defined as the presence of at least one variant known to decrease the level of functional cystic fibrosis transmembrane conductance regulator) with the need for mechanical ventilation or the development of acute lung injury was evaluated. Forty-two children in the Caucasian cohort (n = 304) required mechanical ventilation; 32 developed acute lung injury. Forty-three children in the African American cohort (n = 474) required mechanical ventilation; 29 developed acute lung injury. In African American children, high-risk (TG)mTn alleles known to result in decreased levels of functional cystic fibrosis transmembrane conductance regulator were associated with the need for mechanical ventilation (p = .0013) and the development of acute lung injury (p = .0061). Multivariable analysis demonstrated that high-risk (TG)mTn alleles were independently associated with mechanical ventilation (odds ratios = 3.19; 95% confidence interval, 1.63-6.26) and acute lung injury (odds ratios = 3.36; 95% confidence interval, 1.50-7.53) in African American children.

conclusionGenetic variation in cystic fibrosis transmembrane conductance regulator is associated with acute lung injury in African American children with community-acquired pneumonia.

Indexed as

Acute Lung InjuryAdolescentAllelesBase SequenceBlack or African AmericanChildChild, PreschoolCommunity-Acquired InfectionsCystic Fibrosis Transmembrane Conductance RegulatorDNA PrimersFemaleHumansInfantInfant, NewbornMalePneumoniaCystic Fibrosis Transmembrane Conductance RegulatorDNA Primers

Identifiers

PMID22890249
PMCPMC4273667
OpenAlexW2016300186

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.