Evidence map›Paper›PMID 22885699›Full record

ArticleNature2012

Burkitt lymphoma pathogenesis and therapeutic targets from structural and functional genomics.

Roland Schmitz, Ryan M Young, Michele Ceribelli, Sameer Jhavar, Wenming Xiao, Meili Zhang, George Wright, Arthur L Shaffer, Daniel J Hodson, Eric Buras and 32 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 488 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
488citing papers in PubMed, 3 pooled it
53.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

488 citing papers in PubMed, 3 syntheses or guidelines pooled it, 909 citations in OpenAlex.

  1. A genetic profiling guideline to support diagnosis and clinical management of lymphomas.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2024
    Guideline
  2. Pooled it
  3. Pooled it
  4. Trial
  5. Article
  6. Review
  7. Article
  8. Article
  9. Molecular Pharmacological Characterization of Dicentrine Isolated fromInternational journal of molecular sciences · 2026
    Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Stabilization of cyclin D3 protein by CDKN1A (p21Cell communication and signaling : CCS · 2026
    Article
  16. Review
  17. miRNA profiling in pediatric and young adult Burkitt leukemia and lymphoma.Virchows Archiv : an international journal of pathology · 2026
    Article
  18. Article
  19. Article
  20. Article

428 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

42 authors at 20 institutions in 8 countries.

Roland SchmitzMetabolism Branch Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland 20892, USA.
Ryan M Young
Michele Ceribelli
Sameer Jhavar
Wenming Xiao
Meili Zhang
George Wright
Arthur L Shaffer
Daniel J Hodson
Eric Buras
Xuelu Liu
John Powell
Yandan Yang
Weihong Xu
Hong Zhao
Holger Kohlhammer
Andreas Rosenwald
Philip Kluin
Hans Konrad Müller-Hermelink
German Ott
Randy D Gascoyne
Joseph M Connors
Lisa M Rimsza
Elias Campo
Elaine S Jaffe
Jan Delabie
Erlend B Smeland
Martin D Ogwang
Steven J Reynolds
Richard I Fisher
Rita M Braziel
Raymond R Tubbs
James R Cook
Dennis D Weisenburger
Wing C Chan
Stefania Pittaluga
Wyndham Wilson
Thomas A Waldmann
Martin Rowe
Sam M Mbulaiteye
Alan B Rickinson
Louis M Staudt
National Cancer Institute · USNational Institutes of Health · USCenter for Cancer Research · USBC Cancer Agency · CACancer Research UK Clinical Trials Unit · GBCleveland Clinic · USUniversity of Nebraska Medical Center · USUniversity of Würzburg · DECenter for Information Technology · USDivision of Cancer Epidemiology and GeneticsNational Institute of Allergy and Infectious Diseases · USOregon Health & Science University · USOslo University Hospital · NORobert Bosch Hospital · DESt. Mary's Hospital Lacor · UGUniversitat de Barcelona · ESUniversity of Arizona · USUniversity of Groningen · NLUniversity of Oslo · NOUniversity of Rochester · US

Funding

Epidemiology and Natural History of Cancer-Associated VirusesZIACP010176 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI MBULAITEYE, SAM M · 2009 to 2025
$33.7M
International Center for Excellence in Research (ICER) in Uganda: Impact of ARVsZIAAI001040 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI REYNOLDS, STEVEN · 2009 to 2025
$23.5M
IL-2:IL-15 : implications for cancer therapy (Investigator -Initiated Project)ZIASC004002 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI WALDMANN, THOMAS · 2009 to 2022
$22.9M
Lymphoma Disease Discovery and DefintionZIASC000550 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI JAFFE, ELAINE · 2009 to 2025
$16.9M
International Studies of the Acquired Immune Deficiency Syndrome (AIDS)ZIAAI000361 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI REDD, ANDREW · 2009 to 2025
$15.8M
Molecular Signatures to Improve Diagnosis and Outcome PrU01CA114778 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CHAN, WING C. · 2005 to 2009
$8.7M
Computational Tools For Bioinformatics And Genome AnalysisZIACT000260 · CIT · CENTER FOR INFORMATION TECHNOLOGY · PI POWELL, JOHN I · 2009 to 2015
$5.6M
Molecular Diagnosis and Prognosis in Aggressive LymphomaU01CA157581 · NCI · UNIVERSITY OF ARIZONA · PI RIMSZA, LISA · 2011 to 2015
$3.1M
Cancer Research UKIntramural NIH HHS ZIA CP010176NCI NIH HHS N01-CO-12400NCI NIH HHS U01 CA114778NCI NIH HHS U01-CA 114778NCI NIH HHS U01 CA157581
6 · The paper itself

Abstract

Burkitt's lymphoma (BL) can often be cured by intensive chemotherapy, but the toxicity of such therapy precludes its use in the elderly and in patients with endemic BL in developing countries, necessitating new strategies. The normal germinal centre B cell is the presumed cell of origin for both BL and diffuse large B-cell lymphoma (DLBCL), yet gene expression analysis suggests that these malignancies may use different oncogenic pathways. BL is subdivided into a sporadic subtype that is diagnosed in developed countries, the Epstein-Barr-virus-associated endemic subtype, and an HIV-associated subtype, but it is unclear whether these subtypes use similar or divergent oncogenic mechanisms. Here we used high-throughput RNA sequencing and RNA interference screening to discover essential regulatory pathways in BL that cooperate with MYC, the defining oncogene of this cancer. In 70% of sporadic BL cases, mutations affecting the transcription factor TCF3 (E2A) or its negative regulator ID3 fostered TCF3 dependency. TCF3 activated the pro-survival phosphatidylinositol-3-OH kinase pathway in BL, in part by augmenting tonic B-cell receptor signalling. In 38% of sporadic BL cases, oncogenic CCND3 mutations produced highly stable cyclin D3 isoforms that drive cell cycle progression. These findings suggest opportunities to improve therapy for patients with BL.

Indexed as

GenomicsMolecular Targeted TherapyBasic Helix-Loop-Helix ProteinsBurkitt LymphomaCell CycleCyclin D3Cyclin-Dependent Kinase 6Genes, mycHigh-Throughput Nucleotide SequencingHumansInhibitor of Differentiation ProteinsNeoplasm ProteinsPhosphatidylinositol 3-KinasesReceptors, Antigen, B-CellRNA InterferenceSignal TransductionBasic Helix-Loop-Helix ProteinsCCND3 protein, humanCDK6 protein, humanCyclin D3Cyclin-Dependent Kinase 6ID3 protein, humanInhibitor of Differentiation ProteinsNeoplasm ProteinsPhosphatidylinositol 3-KinasesReceptors, Antigen, B-CellTCF3 protein, human

Identifiers

PMID22885699
PMCPMC3609867
OpenAlexW2118028844

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.