Evidence map›Paper›PMID 22885294›Full record

ArticleJournal of bacteriology2012

The accessory Sec protein Asp2 modulates GlcNAc deposition onto the serine-rich repeat glycoprotein GspB.

Ravin Seepersaud, Barbara A Bensing, Yihfen T Yen, Paul M Sullam

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Biology of Oral Streptococci.Microbiology spectrum · 2018
    Review
  9. Carb loading takes proteins on a ride.The Journal of biological chemistry · 2018
    Article
  10. Article
  11. Article
  12. Defining the enzymatic pathway for polymorphicThe Journal of biological chemistry · 2017
    Article
  13. Article
  14. Emerging facets of prokaryotic glycosylation.FEMS microbiology reviews · 2017
    Review
  15. The sweet tooth of bacteria: common themes in bacterial glycoconjugates.Microbiology and molecular biology reviews : MMBR · 2014
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ravin SeepersaudSan Francisco Veteran Affairs Medical Center and University of California, San Francisco, California, USA.
Barbara A Bensing
Yihfen T Yen
Paul M Sullam
University of California, San Francisco · USSan Francisco VA Medical Center · US

Funding

STREPTOCOCCAL PLATELET BINDING AND ENDOCARDITISR01AI041513 · NIAID · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI SULLAM, PAUL M. · 1997 to 2019
$5.6M
Prophage-Encoded Binding of S. mitis to Human PlateletsR01AI057433 · NIAID · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI SULLAM, PAUL M. · 2004 to 2008
$1.8M
The accessory Sec system of Gram-positive pathogensI01BX001653 · VA · VETERANS AFFAIRS MED CTR SAN FRANCISCO · PI SULLAM, PAUL M. · 2013 to 2016
–
BLRD VA I01 BX001653NIAID NIH HHS R01 AI041513NIAID NIH HHS R01 AI057433NIAID NIH HHS R01AI41513
6 · The paper itself

Abstract

The accessory Sec system is a specialized transport system that exports serine-rich repeat (SRR) glycoproteins of Gram-positive bacteria. This system contains two homologues of the general secretory (Sec) pathway (SecA2 and SecY2) and several other essential proteins (Asp1 to Asp5) that share no homology to proteins of known function. In Streptococcus gordonii, Asp2 is required for the transport of the SRR adhesin GspB, but its role in export is unknown. Tertiary structure predictions suggest that the carboxyl terminus of Asp2 resembles the catalytic region of numerous enzymes that function through a Ser-Asp-His catalytic triad. Sequence alignment of all Asp2 homologues identified a highly conserved pentapeptide motif (Gly-X-Ser(362)-X-Gly) typical of most Ser-Asp-His catalytic triads, where Ser forms the reactive residue. Site-directed mutagenesis of residues comprising the predicted catalytic triad of Asp2 of S. gordonii had no effect upon GspB transport but did result in a marked change in the electrophoretic mobility of the protein. Lectin-binding studies and monosaccharide content analysis of this altered glycoform revealed an increase in glucosamine deposition. Random mutagenesis of the Asp2 region containing this catalytic domain also disrupted GspB transport. Collectively, our findings suggest that Asp2 is a bifunctional protein that is essential for both GspB transport and correct glycosylation. The catalytic domain may be responsible for controlling the glycosylation of GspB, while other surrounding regions are functionally required for glycoprotein transport.

Indexed as

AcetylglucosamineBacterial ProteinsElectrophoretic Mobility Shift AssayGlycoproteinsLectinsModels, MolecularMutagenesis, Site-DirectedMutant ProteinsProtein BindingSequence AlignmentStreptococcus gordoniiAcetylglucosamineBacterial ProteinsGlycoproteinsLectinsMutant Proteins

Identifiers

PMID22885294
PMCPMC3458669
OpenAlexW2117091813

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.