Evidence map›Paper›PMID 22879977›Full record

ArticlePloS one2012

A novel mutation in β integrin reveals an integrin-mediated interaction between the extracellular matrix and cki-1/p27KIP1.

Shingo Kihira, Eun Jeong Yu, Jessica Cunningham, Erin J Cram, Myeongwoo Lee

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact, top 88% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Two alleles ofmicroPublication biology · 2020
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Shingo KihiraDepartment of Biology, Baylor University, Waco, Texas, United States of America.
Eun Jeong Yu
Jessica Cunningham
Erin J Cram
Myeongwoo Lee
Baylor University · USNortheastern University · US

Funding

Characterization of a novel regulator of cell migrationR01GM085077 · NIGMS · NORTHEASTERN UNIVERSITY · PI CRAM, ERIN JEAN · 2008 to 2012
$1.4M
Role of integrin signaling in gonad functionsR15GM077156 · NIGMS · BAYLOR UNIVERSITY · PI LEE, MYEONGWOO · 2006 to 2007
$220k
NIGMS NIH HHS GM077156NIGMS NIH HHS R01 GM085077NIGMS NIH HHS R15 GM077156
6 · The paper itself

Abstract

The cell-extracellular matrix (ECM) interaction plays an essential role in maintaining tissue shapes and regulates cell behaviors such as cell adhesion, differentiation and proliferation. The mechanism by which the ECM influences the cell cycle in vivo is poorly understood. Here we demonstrate that the β integrin PAT-3 regulates the localization and expression of CKI-1, a C. elegans homologue of the cyclin dependent kinase inhibitor p27(KIP1). In nematodes expressing wild type PAT-3, CKI-1::GFP localizes primarily to nucleoli in hypodermal cells, whereas in animals expressing mutant pat-3 with a defective splice junction, CKI-1::GFP appears clumped and disorganized in nucleoplasm. RNAi analysis links cell adhesion genes to the regulation of CKI-1. RNAi of unc-52/perlecan, ina-1/α integrin, pat-4/ILK, and unc-97/PINCH resulted in abnormal CKI-1::GFP localization. Additional RNAi experiments revealed that the SCF E3 ubiquitin-ligase complex genes, skpt-1/SKP2, cul-1/CUL1 and lin-23/F-box, are required for the proper localization and expression of CKI-1, suggesting that integrin signaling and SCF E3 ligase work together to regulate the cellular distribution of CKI-1. These data also suggest that integrin plays a major role in maintaining proper CKI-1/p27(KIP1) levels in the cell. Perturbed integrin signaling may lead to the inhibition of SCF ligase activity, mislocalization and elevation of CKI-1/p27(KIP1). These results suggest that adhesion signaling is crucial for cell cycle regulation in vivo.

Indexed as

Amino Acid SequenceAnimalsAnimals, Genetically ModifiedCaenorhabditis elegansCaenorhabditis elegans ProteinsCell NucleusCyclin-Dependent Kinase Inhibitor p27Cyclin-Dependent Kinase Inhibitor ProteinsExtracellular MatrixFocal AdhesionsGene Expression RegulationGreen Fluorescent ProteinsImmunoblottingIntegrin beta ChainsModels, BiologicalMolecular Sequence DataCaenorhabditis elegans Proteinscki-1 protein, C elegansCyclin-Dependent Kinase Inhibitor p27Cyclin-Dependent Kinase Inhibitor ProteinsGreen Fluorescent ProteinsIntegrin beta Chainspat-3 protein, C elegansRecombinant Fusion ProteinsUbiquitin

Identifiers

PMID22879977
PMCPMC3412830
OpenAlexW2079672412

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.