Evidence map›Paper›PMID 22878963›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2012

Tracing the evolutionary history of the pandemic group A streptococcal M1T1 clone.

Peter G Maamary, Nouri L Ben Zakour, Jason N Cole, Andrew Hollands, Ramy K Aziz, Timothy C Barnett, Amanda J Cork, Anna Henningham, Martina Sanderson-Smith, Jason D McArthur and 10 more

Abstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Genomic analysis of group AJournal of the Association of Medical Microbiology and Infectious Disease Canada = Journal officiel de l'Association pour la microbiologie medicale et l'infectiologie Canada · 2022
    Article
  6. Article
  7. The Role of Glycosylation in Infectious Diseases.Advances in experimental medicine and biology · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Glycointeractions in bacterial pathogenesis.Nature reviews. Microbiology · 2018
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Peter G MaamarySchool of Chemistry and Molecular Biosciences, University of Queensland, St. Lucia, QLD, 4072, Australia.
Nouri L Ben Zakour
Jason N Cole
Andrew Hollands
Ramy K Aziz
Timothy C Barnett
Amanda J Cork
Anna Henningham
Martina Sanderson-Smith
Jason D McArthur
Carola Venturini
Christine M Gillen
Joshua K Kirk
Dwight R Johnson
William L Taylor
Edward L Kaplan
Malak Kotb
Victor Nizet
Scott A Beatson
Mark J Walker

Funding

GAS Switch from Colonizing Bacterium to Invasive PathogenR01AI077780 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIZET, VICTOR · 2008 to 2019
$3.8M
NIAID NIH HHS AI077780NIAID NIH HHS R01 AI077780
6 · The paper itself

Abstract

The past 50 years has witnessed the emergence of new viral and bacterial pathogens with global effect on human health. The hyperinvasive group A Streptococcus (GAS) M1T1 clone, first detected in the mid-1980s in the United States, has since disseminated worldwide and remains a major cause of severe invasive human infections. Although much is understood regarding the capacity of this pathogen to cause disease, much less is known of the precise evolutionary events selecting for its emergence. We used high-throughput technologies to sequence a World Health Organization strain collection of serotype M1 GAS and reconstructed its phylogeny based on the analysis of core genome single-nucleotide polymorphisms. We demonstrate that acquisition of a 36-kb genome segment from serotype M12 GAS and the bacteriophage-encoded DNase Sda1 led to increased virulence of the M1T1 precursor and occurred relatively early in the molecular evolutionary history of this strain. The more recent acquisition of the phage-encoded superantigen SpeA is likely to have provided selection advantage for the global dissemination of the M1T1 clone. This study provides an exemplar for the evolution and emergence of virulent clones from microbial populations existing commensally or causing only superficial infection.

Indexed as

Biological EvolutionPandemicsAnimalsBacterial ProteinsCell LineDisease Models, AnimalEpithelial CellsExotoxinsGene Expression Regulation, BacterialGenome, BacterialGlobal HealthHost-Pathogen InteractionsHumansMembrane ProteinsMiceNeutrophilsBacterial ProteinsExotoxinsMembrane ProteinsSpeA protein, Streptococcus pyogenes

Identifiers

PMID22878963
PMCPMC3475248

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.