Evidence map›Paper›PMID 22878689›Full record

ArticleJournal of computational neuroscience2013

Relating ion channel expression, bifurcation structure, and diverse firing patterns in a model of an identified motor neuron.

Marco A Herrera-Valdez, Erin C McKiernan, Sandra D Berger, Stefanie Ryglewski, Carsten Duch, Sharon Crook

Open access · greenAbstract read
In one paragraph

Article in Journal of computational neuroscience, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Neuronal Network Models for Sensory Discrimination.Conference record. Asilomar Conference on Signals, Systems & Computers · 2016
    Article
  6. Article
  7. Article
  8. Article
  9. Correlations in ion channel expression emerge from homeostatic tuning rules.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Marco A Herrera-ValdezInstitute of Interdisciplinary Research, University of Puerto Rico at Cayey, 205 Antonio R. Barcelo Ave., Cayey, PR 00736, USA. Marco.Herrera@upr.edu
Erin C McKiernan
Sandra D Berger
Stefanie Ryglewski
Carsten Duch
Sharon Crook
Arizona State University · USUniversity of Puerto Rico at Cayey · PRJohannes Gutenberg University Mainz · DE

Funding

Strengthening interdisciplinary research and training at the UPR CayeyP20MD006144 · NIMHD · UNIVERSITY OF PR CAYEY UNIVERSITY COLL · PI MEDINA, MARIO · 2010 to 2014
$3.7M
CRCNS Data Sharing: NeuroML Database for Multiscale Neuroscience ModelsR01EB014640 · NIBIB · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI CROOK, SHARON MARIE · 2011 to 2013
$265k
NIBIB NIH HHS R01 EB014640NIMHD NIH HHS P20 MD006144
6 · The paper itself

Abstract

Neurons show diverse firing patterns. Even neurons belonging to a single chemical or morphological class, or the same identified neuron, can display different types of electrical activity. For example, motor neuron MN5, which innervates a flight muscle of adult Drosophila, can show distinct firing patterns under the same recording conditions. We developed a two-dimensional biophysical model and show that a core complement of just two voltage-gated channels is sufficient to generate firing pattern diversity. We propose Shab and DmNa v to be two candidate genes that could encode these core currents, and find that changes in Shab channel expression in the model can reproduce activity resembling the main firing patterns observed in MN5 recordings. We use bifurcation analysis to describe the different transitions between rest and spiking states that result from variations in Shab channel expression, exposing a connection between ion channel expression, bifurcation structure, and firing patterns in models of membrane potential dynamics.

Indexed as

Models, NeurologicalAction PotentialsAnimalsAnimals, Genetically ModifiedBiophysicsComputer SimulationDrosophila melanogasterDrosophila ProteinsElectric StimulationGreen Fluorescent ProteinsIon ChannelsMotor NeuronsPatch-Clamp TechniquesTranscription FactorsDrosophila ProteinsGreen Fluorescent ProteinsIon ChannelsTranscription Factors

Identifiers

PMID22878689
PMCPMC6595220
OpenAlexW2129203737

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.