Evidence map›Paper›PMID 22876322›Full record

ArticlePloS one2012

Genetic variants in ER cofactor genes and endometrial cancer risk.

Yuqing Li, Hui-Qi Low, Jia Nee Foo, Hatef Darabi, Kristjana Einarsdόttir, Keith Humphreys, Amanda Spurdle, ANECS Group, Douglas F Easton, Deborah J Thompson and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 4 countries.

Yuqing LiHuman Genetics, Genome Institute of Singapore, Singapore, Singapore.
Hui-Qi Low
Jia Nee Foo
Hatef Darabi
Kristjana Einarsdόttir
Keith Humphreys
Amanda Spurdle
ANECS Group
Douglas F Easton
Deborah J Thompson
Alison M Dunning
Paul D P Pharoah
Kamila Czene
Kee Seng Chia
Per Hall
Jianjun Liu
Genome Institute of Singapore · SGUniversity of Cambridge · GBKarolinska Institutet · SENational University of Singapore · SGQIMR Berghofer Medical Research Institute · AUThe Kids Research Institute Australia · AU

Funding

Cancer Research UK 10118Cancer Research UK 10124Cancer Research UK 11022Cancer Research UK C490/A10124Medical Research Council 339435Medical Research Council 552402Medical Research Council G0000934Wellcome TrustWellcome Trust 068545/Z/02Wellcome Trust 085475
6 · The paper itself

Abstract

Given that the transcriptional regulatory activity of estrogen receptor (ER) is modulated by its biochemical cofactors, genetic variation within the ER cofactor genes may alter cellular response to estrogen exposure and consequently modify the risk for endometrial cancer. We genotyped 685 tagging SNPs within 60 ER cofactor genes in 564 endometrial cancer cases and 1,510 controls from Sweden, and tested their associations with the risk of endometrial cancer. We investigated the associations of individual SNPs by using a trend test as well as multiple SNPs within a gene or gene complex by using multi-variant association analysis. No significant association was observed for any individual SNPs or genes, but a marginal association of the cumulative genetic variation of the NCOA2 complex as a whole (NCOA2, CARM1, CREBBP, PRMT1 and EP300) with endometrial cancer risk was observed (P(adjusted) = 0.033). However, the association failed to be replicated in an independent European dataset of 1265 cases and 5190 controls (P = 0.71). The results indicate that common genetic variants within ER cofactor genes are unlikely to play a significant role in endometrial cancer risk in European population.

Indexed as

Polymorphism, Single NucleotideAgedCREB-Binding ProteinEndometrial NeoplasmsEndosomal Sorting Complexes Required for TransportFemaleGenetic Predisposition to DiseaseHumansMiddle AgedNedd4 Ubiquitin Protein LigasesNuclear Receptor Coactivator 2Receptors, EstrogenReproducibility of ResultsRiskSwedenUbiquitin-Protein LigasesCREB-Binding ProteinEndosomal Sorting Complexes Required for TransportNedd4 Ubiquitin Protein LigasesNuclear Receptor Coactivator 2Receptors, EstrogenUbiquitin-Protein Ligases

Identifiers

PMID22876322
PMCPMC3411617
OpenAlexW2095220822

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.