Evidence map›Paper›PMID 22875986›Full record

ArticleMolecular biology of the cell2012

Combined computational and experimental analysis reveals mitogen-activated protein kinase-mediated feedback phosphorylation as a mechanism for signaling specificity.

Nan Hao, Necmettin Yildirim, Michal J Nagiec, Stephen C Parnell, Beverly Errede, Henrik G Dohlman, Timothy C Elston

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Nan HaoDepartment of Pharmacology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Necmettin Yildirim
Michal J Nagiec
Stephen C Parnell
Beverly Errede
Henrik G Dohlman
Timothy C Elston
University of North Carolina at Chapel Hill · USNew College of Florida · USUniversity of Kansas · US

Funding

Spatiotemporal modeling of signal transduction in yeastR01GM079271 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ELSTON, TIMOTHY C, ERREDE, BEVERLY · 2006 to 2017
$4.0M
Modeling Feedback Regulation of Cell SignalingR01GM073180 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DOHLMAN, HENRIK G. · 2005 to 2012
$2.6M
MAP kinase regulation of cell-fate transitions in yeastR01GM084071 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ELSTON, TIMOTHY C, ERREDE, BEVERLY · 2009 to 2012
$1.4M
NIGMS NIH HHS GM073180NIGMS NIH HHS GM079271NIGMS NIH HHS GM084071NIGMS NIH HHS R01 GM073180NIGMS NIH HHS R01 GM079271NIGMS NIH HHS R01 GM084071
6 · The paper itself

Abstract

Different environmental stimuli often use the same set of signaling proteins to achieve very different physiological outcomes. The mating and invasive growth pathways in yeast each employ a mitogen-activated protein (MAP) kinase cascade that includes Ste20, Ste11, and Ste7. Whereas proper mating requires Ste7 activation of the MAP kinase Fus3, invasive growth requires activation of the alternate MAP kinase Kss1. To determine how MAP kinase specificity is achieved, we used a series of mathematical models to quantitatively characterize pheromone-stimulated kinase activation. In accordance with the computational analysis, MAP kinase feedback phosphorylation of Ste7 results in diminished activation of Kss1, but not Fus3. These findings reveal how feedback phosphorylation of a common pathway component can limit the activity of a competing MAP kinase through feedback phosphorylation of a common activator, and thereby promote signal fidelity.

Indexed as

Feedback, PhysiologicalMAP Kinase Signaling SystemModels, BiologicalProtein Processing, Post-TranslationalAlgorithmsComputer SimulationMitogen-Activated Protein Kinase KinasesMitogen-Activated Protein KinasesMonte Carlo MethodNonlinear DynamicsPhosphorylationProtein KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsFUS3 protein, S cerevisiaeKSS1 protein, S cerevisiaeMitogen-Activated Protein Kinase KinasesMitogen-Activated Protein KinasesProtein KinasesSaccharomyces cerevisiae ProteinsSTE7 protein, S cerevisiae

Identifiers

PMID22875986
PMCPMC3459865
OpenAlexW2110480988

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.