Evidence map›Paper›PMID 22875567›Full record

ArticleCurrent protocols in microbiology2012

Detection, isolation, and identification of Vibrio cholerae from the environment.

Anwar Huq, Bradd J Haley, Elisa Taviani, Arlene Chen, Nur A Hasan, Rita R Colwell

Abstract read
In one paragraph

Article in Current protocols in microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Article
  2. Draft genome sequences of three non-O1/non-O139Microbiology resource announcements · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Allelic variations and gene cluster modularity act as nonlinear bottlenecks for cholera emergence.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. mSphere · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Recovery of Pasteurization-ResistantFoods (Basel, Switzerland) · 2022
    Article
  15. Prevalence and Antimicrobial Resistance ofAntibiotics (Basel, Switzerland) · 2022
    Article
  16. Article
  17. Ecological diversification reveals routes of pathogen emergence in endemicProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Article
  19. Article
  20. Molecular detection ofJournal of environmental health science & engineering · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anwar HuqMaryland Pathogen Research Institute, Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, College Park, Maryland, USA.
Bradd J Haley
Elisa Taviani
Arlene Chen
Nur A Hasan
Rita R Colwell

Funding

EPIDEMIOLOGY &ECOLOGY OF VIBRIO CHOLERAE IN BANGLADESHR01AI039129 · NIAID · JOHNS HOPKINS UNIVERSITY · PI SACK, DAVID A · 1996 to 2014
$15.2M
Effects of Climate Change on Cholera Dynamics and PredictionRC1TW008587 · FIC · TUFTS UNIVERSITY MEDFORD · PI ISLAM, SHAFIQUL · 2010 to 2010
$500k
CCR NIH HHS 1RC1TW008587-01FIC NIH HHS RC1 TW008587NIAID NIH HHS R01 AI039129PHS HHS 2R01A1039129-11A2
6 · The paper itself

Abstract

Recent molecular advances in microbiology have greatly improved the detection of bacterial pathogens in the environment. These improvements and a downward trend in the cost of molecular detection methods have contributed to increased frequency of detection of pathogenic microorganisms where traditional culture-based detection methods have failed. Culture methods also have been greatly improved, and the confluence of the two suites of methods provides a powerful tool for detection, isolation, and characterization of pathogens. While molecular detection provides data on the presence and type of pathogens, culturing methods allow a researcher to preserve the organism of interest for "-omics" studies, such as genomic, metabolomic, secretomic, and transcriptomic analysis, which are rapidly becoming more affordable. This has yielded a clearer understanding of the ecology and epidemiology of microorganisms that cause disease. In this unit, we present commonly accepted methods for isolation, detection, and characterization of V. cholerae, providing more extensive knowledge of the ecology and epidemiology of this organism. This unit has been fully revised and updated from the earlier version with the latest knowledge and additional information not previously included.

Indexed as

Environmental MicrobiologyAnimalsCholeraColony Count, MicrobialHumansIn Situ HybridizationPolymerase Chain ReactionShellfishVibrio cholerae

Identifiers

PMID22875567
PMCPMC3461827

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.