Evidence map›Paper›PMID 22868229›Full record

ArticleBioorganic & medicinal chemistry letters2012

A fluorescent reporter of ATP binding-competent receptor kinases.

Renaud Sicard, Jyothi Dhuguru, Wenjun Liu, Nirav Patel, Ralf Landgraf, James N Wilson

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry letters, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Renaud SicardDepartment of Biochemistry and Molecular Biology, University of Miami, Miami, FL 33101-6129, United States.
Jyothi Dhuguru
Wenjun Liu
Nirav Patel
Ralf Landgraf
James N Wilson

Funding

Role and Mechanism of HER2 Self-Association in CancerR01CA098881 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LANDGRAF, RALF · 2003 to 2012
$2.5M
NCI NIH HHS CA98881-05NCI NIH HHS R01 CA098881
6 · The paper itself

Abstract

ERBB receptor kinases play a crucial role in normal development and cancer malignancies. A broad range of modifications creates receptor subpopulations with distinct functional properties in live cells. Their apparent activation state, typically assayed by tyrosine phosphorylation of substrates, reflects a complex equilibrium of competing reactions. With the aim of developing optical tools to investigate ERBB populations and their state of activation, we have synthesized a fluorescent 'turn-on' probe, DMAQ, targeting the ERBB ATP binding pocket. Upon binding, probe emission increases due to the hydrophobic environment and restricted geometry of the ERBB2 kinase domain, facilitating the analysis of receptor states at low occupancy and without the removal of unbound probes. Cellular ERBB2 autophosphorylation is inhibited with saturation kinetics that correlate with the increase in probe fluorescence. Thus, DMAQ is an example of a new generation of 'turn-on' probes with potential applications in querying receptor kinase populations both in vitro and in live cells.

Indexed as

Adenosine TriphosphateBinding SitesBreast NeoplasmsCell Line, TumorCell SurvivalErb-b2 Receptor Tyrosine KinasesFemaleFluorescent DyesHumansModels, MolecularPhosphorylationQuinazolinesSpectrometry, FluorescenceAdenosine TriphosphateErb-b2 Receptor Tyrosine KinasesFluorescent DyesQuinazolines

Identifiers

PMID22868229
PMCPMC8087213

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.