Evidence map›Paper›PMID 22865872›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2012

Mycobacterium tuberculosis Beijing strains favor transmission but not drug resistance in China.

Chongguang Yang, Tao Luo, Guomei Sun, Ke Qiao, Gang Sun, Kathryn DeRiemer, Jian Mei, Qian Gao

Open access · bronzeAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 1 synthesis or guideline pooled it, 98 citations in OpenAlex.

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  20. Spoligotype Variation ofThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Chongguang YangKey Laboratory of Medical Molecular Virology, Institutes of Biomedical Sciences and Institute of Medical Microbiology, Fudan University, 138 Yi Xue Yuan Road, Shanghai, China.
Tao Luo
Guomei Sun
Ke Qiao
Gang Sun
Kathryn DeRiemer
Jian Mei
Qian Gao
Fudan University · CNShanghai Municipal Center For Disease Control Prevention · CNUniversity of California, Davis · US

Funding

Transmission and virulence of Mycobacterium tuberculosisDP2OD006452 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI DERIEMER, KATHRYN L · 2010 to 2010
$2.3M
UC Davis-China Infectious Disease Research TrainingD43TW007887 · FIC · UNIVERSITY OF CALIFORNIA AT DAVIS · PI DERIEMER, KATHRYN L · 2008 to 2012
$743k
FIC NIH HHS D43 TW007887NIH HHS DP2 OD006452
6 · The paper itself

Abstract

backgroundThe Mycobacterium tuberculosis Beijing strains are widespread globally. We aimed to determine whether Beijing strains in China are more likely than other strains to spread, and whether they are more likely to become drug resistant. We also sought to determine whether different Beijing sublineages have distinct phenotypic characteristics.

methodsWe conducted a population-based molecular epidemiologic study in 6 provinces in China from 2009 to 2010. We analyzed data and specimens from culture-confirmed pulmonary tuberculosis patients. Each patient's isolate was genotyped using 16-loci variable number of tandem repeats and 6 single-nucleotide polymorphisms.

resultsBy genotyping, 75.0% (1031/1375) of the strains of M. tuberculosis were Beijing strains. Beijing strains were more likely than non-Beijing strains to be in a genotypic cluster (odds ratio, 2.40, P < .001), and were significantly associated with younger age (P(trend) < .05). There was no significant difference in the proportion of Beijing strains and non-Beijing strains that were drug resistant, even when stratified by new vs retreatment patients. We identified 6 sublineages of Beijing strains in the study population. The modern sublineage of Beijing strains were more likely than the ancient sublineages to be clustered (odds ratio, 2.27, P < .001).

conclusionsBeijing strains of M. tuberculosis were significantly associated with genotypic clustering, reflecting recent transmission, and younger age, but were not associated with drug resistance. Future studies of Beijing family strains should avoid assuming and attributing characteristics to the entire family and should assess strains of specific sublineages and/or settings.

Indexed as

Drug Resistance, BacterialAdolescentAdultAgedAged, 80 and overAntitubercular AgentsChinaCluster AnalysisFemaleGenotypeHumansMaleMiddle AgedMinisatellite RepeatsMolecular EpidemiologyMolecular TypingAntitubercular Agents

Identifiers

PMID22865872
PMCPMC3466095
OpenAlexW2171166848

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.