Evidence map›Paper›PMID 22865848›Full record

ArticleJournal of bacteriology2012

Role of the Helicobacter pylori sensor kinase ArsS in protein trafficking and acid acclimation.

Elizabeth A Marcus, George Sachs, Yi Wen, Jing Feng, David R Scott

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. TheJournal of bacteriology · 2024
    Article
  3. Review
  4. What bacteria want.Environmental microbiology · 2018
    Review
  5. Review
  6. Article
  7. Eradication of Helicobacter pylori Infection.Current gastroenterology reports · 2016
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Helicobacter pylori impedes acid-induced tightening of gastric epithelial junctions.American journal of physiology. Gastrointestinal and liver physiology · 2013
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Elizabeth A MarcusDepartment of Pediatrics, David Geffen School of Medicine at UCLA, Los Angeles, California, USA.
George Sachs
Yi Wen
Jing Feng
David R Scott
VA West Los Angeles Medical Center · USUniversity of California, Los Angeles · US

Funding

Pilot and Feasibility ProgramP30DK041301 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KASAHARA, NORIYUKI · 1990 to 2019
$18.0M
GASTROENTEROLOGYT32DK007180 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JENSEN, DENNIS MICHAEL · 1986 to 2025
$10.0M
UCLA Child Health Research Career Development AwardK12HD034610 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DEVASKAR, SHERIN U · 2002 to 2017
$6.6M
Acid Adaptation Targets for Eradication of Helicobacter pyloriI01BX001006 · VA · VA GREATER LOS ANGELES HEALTHCARE SYSTEM · PI SACHS, GEORGE · 2011 to 2018
–
SIMIAN RETROVIRUSES--NOVEL GENE DELIVERY VECTORSR21DK053462 · NIDDK · OREGON REGIONAL PRIMATE RESEARCH CENTER · PI MACHIDA, CURTIS A · 1998 to 1999
–
BHP HRSA HHS P30 DH41301BLRD VA I01 BX001006NICHD NIH HHS K12 HD034610NICHD NIH HHS K12HD034610NIDDK NIH HHS DK053462NIDDK NIH HHS P30 DK041301NIDDK NIH HHS T32 DK007180NIDDK NIH HHS T32 DK07180-34
6 · The paper itself

Abstract

Helicobacter pylori survives and grows at low pHs via acid acclimation mechanisms that enable periplasmic pH homeostasis. Important components include a cytoplasmic urease; a pH-gated urea channel, UreI; and periplasmic α-carbonic anhydrase. To allow the rapid adjustment of periplasmic pH, acid acclimation components are recruited to the inner membrane in acid. The ArsRS two-component system, in an acid-responsive manner, controls the transcription of the urease gene cluster and α-carbonic anhydrase. The aim of this study is to determine the role of ArsS in protein trafficking as a component of acid acclimation. H. pylori wild-type and ΔarsS bacteria were incubated at acidic and neutral pHs. Intact bacteria, purified membranes, and total protein were analyzed by Western blotting and urease activity measurements. The total urease activity level was decreased in the ΔarsS strain, but the acid activation of UreI was unaffected. A 30-min acid exposure increased the level and activity of urease proteins at the membrane in the wild type but not in the ΔarsS strain. The urease levels and activity of the ΔarsS strain after a 90-min acid exposure were similar to those of the wild type. ArsS, in addition to its role in urease gene transcription, is also involved in the recruitment of urease proteins to the inner membrane to augment acid acclimation during acute acid exposure. Urease membrane recruitment following prolonged acid exposure in the absence of ArsS was similar to that of the wild type, suggesting a compensatory mechanism, possibly regulated by FlgS, underscoring the importance of urease membrane recruitment and activation in periplasmic pH homeostasis.

Indexed as

Stress, PhysiologicalAcidsBacterial ProteinsBlotting, WesternCell MembraneGene DeletionGene Expression Regulation, BacterialHelicobacter pyloriProtein KinasesProtein TransportUreaseAcidsBacterial ProteinsProtein KinasesUrease

Identifiers

PMID22865848
PMCPMC3458681
OpenAlexW2109592084

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.