Evidence map›Paper›PMID 22864287›Full record

ArticleNature structural & molecular biology2012

PHF20 is an effector protein of p53 double lysine methylation that stabilizes and activates p53.

Gaofeng Cui, Sungman Park, Aimee I Badeaux, Donghwa Kim, Joseph Lee, James R Thompson, Fei Yan, Satoshi Kaneko, Zengqiang Yuan, Maria Victoria Botuyan and 3 more

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 97 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Lysine and arginine methylation of transcription factors.Cellular and molecular life sciences : CMLS · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Deciphering the PTM codes of the tumor suppressor p53.Journal of molecular cell biology · 2022
    Review
  16. Article
  17. Article
  18. Observational
  19. Searching for Biological Function of the Mysterious PA2504 Protein fromInternational journal of molecular sciences · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Gaofeng CuiDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota, USA.
Sungman Park
Aimee I Badeaux
Donghwa Kim
Joseph Lee
James R Thompson
Fei Yan
Satoshi Kaneko
Zengqiang Yuan
Maria Victoria Botuyan
Mark T Bedford
Jin Q Cheng
Georges Mer
Mayo Clinic · USMolecular Oncology (United States) · USMoffitt Cancer Center · USThe University of Texas MD Anderson Cancer Center · USWinnMed · USInstitute of Biophysics · CN

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI KENNETH Lynn WRIGHT · 1998 to 2026
$93.5M
Pilot Project ProgramP30ES007784 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RICHIE, ELLEN R · 1996 to 2011
$16.4M
Structural Biology of Lysine Methylation in DNA Damage and Checkpoint SignalingR01CA132878 · NCI · MAYO CLINIC ROCHESTER · PI Georges Mer · 2008 to 2026
$4.5M
Training in Molecular Toxicology/Environmental DiseaseT32ES007247 · NIEHS · UNIVERSITY OF TEXAS AUSTIN · PI RICHBURG, JOHN H · 1990 to 2014
$2.9M
IKBKE/IKKE (epsilon) Kinase in Non-small Cell Lung CancerR01CA160455 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI CHENG, JIN Q · 2012 to 2016
$1.7M
MicroRNAs in Human Ovarian CancerR01CA137041 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI CHENG, JIN Q · 2009 to 2013
$1.7M
NCI NIH HHS CA132878NCI NIH HHS CA137041NCI NIH HHS P30 CA076292NCI NIH HHS R01 CA132878NCI NIH HHS R01 CA137041NCI NIH HHS R01 CA160455NIEHS NIH HHS 5T32ES007247NIEHS NIH HHS ES007784NIEHS NIH HHS P30 ES007784NIEHS NIH HHS T32 ES007247
6 · The paper itself

Abstract

PHF20 is a multidomain protein and subunit of a lysine acetyltransferase complex that acetylates histone H4 and p53 but whose function is unclear. Using biochemical, biophysical and cellular approaches, we determined that PHF20 is a direct regulator of p53. A Tudor domain in PHF20 recognized p53 dimethylated at Lys370 or Lys382 and a homodimeric form of this Tudor domain could associate with the two dimethylated sites on p53 with enhanced affinity, indicating a multivalent interaction. Association with PHF20 promotes stabilization and activation of p53 by diminishing Mdm2-mediated p53 ubiquitylation and degradation. PHF20 contributes to upregulation of p53 in response to DNA damage, and ectopic expression of PHF20 in different cell lines leads to phenotypic changes that are hallmarks of p53 activation. Overall our work establishes that PHF20 functions as an effector of p53 methylation that stabilizes and activates p53.

Indexed as

Antigens, NeoplasmBiomarkers, TumorCell LineCell Line, TumorCrystallography, X-RayDNA-Binding ProteinsDNA DamageGene Knockdown TechniquesHumansLysineMethylationModels, MolecularProtein MultimerizationProtein StabilityProtein Structure, TertiaryTranscription FactorsAntigens, NeoplasmBiomarkers, TumorDNA-Binding ProteinsLysinePHF20 protein, humanTranscription FactorsTumor Suppressor Protein p53

Identifiers

PMID22864287
PMCPMC3454513
OpenAlexW1974322725

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.