Evidence map›Paper›PMID 22863785›Full record

ArticleNature medicine2012

Bat3 promotes T cell responses and autoimmunity by repressing Tim-3–mediated cell death and exhaustion.

Manu Rangachari, Chen Zhu, Kaori Sakuishi, Sheng Xiao, Jozsef Karman, Andrew Chen, Mathieu Angin, Andrew Wakeham, Edward A Greenfield, Raymond A Sobel and 6 more

Abstract read
In one paragraph

Article in Nature medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 246 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
246citing papers in PubMed, 1 pooled it
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

246 citing papers in PubMed, 1 synthesis or guideline pooled it, 374 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. TIM-3 in Cardiovascular Disease.Current heart failure reports · 2026
    Review
  8. TIM-3 in AML: pathogenic roles and therapeutic targetability.Clinical and experimental medicine · 2026
    Review
  9. Article
  10. Immune checkpoint TIM-3 in tumor immunotherapy.Acta biochimica et biophysica Sinica · 2026
    Review
  11. Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review

186 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 2 countries.

Manu RangachariCenter for Neurologic Diseases, Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Chen Zhu
Kaori Sakuishi
Sheng Xiao
Jozsef Karman
Andrew Chen
Mathieu Angin
Andrew Wakeham
Edward A Greenfield
Raymond A Sobel
Hitoshi Okada
Peter J McKinnon
Tak W Mak
Marylyn M Addo
Ana C Anderson
Vijay K Kuchroo
Harvard University · USBrigham and Women's Hospital · USPrincess Margaret Cancer Centre · CARagon Institute of MGH, MIT and Harvard · USDana-Farber Cancer Institute · USOntario Institute for Cancer Research · CAStanford University · USSt. Jude Children's Research Hospital · US

Funding

The impact of HIV viral diversity and cellular immunity on HIV pathogenesisP30AI060354 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI ROBERT A. PARKER · 2004 to 2026
$94.4M
Transgenic / Knock-out mouse coreP01AI073748 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI KUCHROO, VIJAY K. · 2008 to 2019
$17.1M
The function of T Bet in EAEP01NS038037 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI WEINER, HOWARD L · 2000 to 2010
$12.8M
ATM and DNA Damage in the Nervous SystemR01NS037956 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MCKINNON, PETER J · 1998 to 2022
$7.6M
Role of Th1 specific cell surface molecule Tim-3 in EAE.R01NS045937 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI KUCHROO, VIJAY K. · 2003 to 2016
$4.9M
T CELL RESPONSE TO MYELIN PROTEOLIPID PROTEINR01NS030843 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI KUCHROO, VIJAY K. · 1998 to 2019
$4.1M
The role of Tim-1 in immune regulation and autoimmunityK01DK090105 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI XIAO, SHENG · 2011 to 2015
$796k
T cell regulation: CD4+CD25+ FOXP3+ T cells in acute and chronic HIV-1 infectionK08AI074405 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI ADDO, MARYLYN MARTINA · 2007 to 2010
$610k
CIHRNIAID NIH HHS AI073748NIAID NIH HHS K08 AI074405NIAID NIH HHS P01 AI073748NIAID NIH HHS P30 AI060354NIDDK NIH HHS K01 DK090105NIDDK NIH HHS K01DK090105NINDS NIH HHS NS038037NINDS NIH HHS NS045937NINDS NIH HHS P01 NS038037NINDS NIH HHS R01 NS030843NINDS NIH HHS R01 NS037956NINDS NIH HHS R01 NS045937
6 · The paper itself

Abstract

T cell immunoglobulin and mucin domain–containing 3 (Tim-3) is an inhibitory receptor that is expressed on exhausted T cells during infection with HIV-1 and hepatitis C virus. By contrast, Tim-3 expression and function are defective in multiple human autoimmune diseases. However, the molecular mechanisms modulating Tim-3 function are not well understood. Here we show that human leukocyte antigen B (HLA-B)-associated transcript 3 (Bat3) binds to, and represses the function of, Tim-3. Bat3 protects T helper type 1 (TH1) cells from galectin-9–mediated cell death and promotes both proliferation and proinflammatory cytokine production. Bat3-deficient T cells have elevated expression of exhaustion-associated molecules such as Tim-3, Lag3, Prdm1 and Pbx3, and Bat3 knockdown in myelin-antigen–specific CD4+ T cells markedly inhibits the development of experimental autoimmune encephalomyelitis while promoting the expansion of a dysfunctional Tim-3hi, interferon-γ (IFN-γ)loCD4+ cell population. Furthermore, expression of Bat3 is reduced in exhausted Tim-3+ T cells from mouse tumors and HIV-1–infected individuals. These data indicate that Bat3 acts as an inhibitor of Tim-3–dependent exhaustion and cell death. Bat3 may thus represent a viable therapeutic target in autoimmune disorders, chronic infections and cancers.

Indexed as

AnimalsAutoimmunityCell DeathDNA-Binding ProteinsFlow CytometryGenetic VectorsHEK293 CellsHepatitis A Virus Cellular Receptor 2Homeodomain ProteinsHumansMembrane ProteinsMiceMice, KnockoutMolecular ChaperonesReal-Time Polymerase Chain ReactionRetroviridaeBAG6 protein, humanBCL2-associated athanogene 1 proteinDNA-Binding ProteinsHAVCR2 protein, humanHepatitis A Virus Cellular Receptor 2Homeodomain ProteinsMembrane ProteinsMolecular ChaperonesRAG-1 proteinTranscription Factors

Identifiers

PMID22863785
PMCPMC3491118
OpenAlexW1968791512

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.