Evidence map›Paper›PMID 22863773›Full record

ArticleThe EMBO journal2012

Generation of DNA single-strand displacement by compromised nucleotide excision repair.

Camille Godon, Sophie Mourgues, Julie Nonnekens, Amandine Mourcet, Fréderic Coin, Wim Vermeulen, Pierre-Olivier Mari, Giuseppina Giglia-Mari

Abstract read
In one paragraph

Article in The EMBO journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. XAB2 TagSNP Is Associated with the Risk of Gastric Cancer in Chinese Population: A Case-Control Study.International journal of environmental research and public health · 2021
    Article
  4. The DNA damage response to transcription stress.Nature reviews. Molecular cell biology · 2019
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. ELL, a novel TFIIH partner, is involved in transcription restart after DNA repair.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 2 countries.

Camille GodonDepartment of Cancer Biology, CNRS, IPBS, Toulouse, France.
Sophie Mourgues
Julie Nonnekens
Amandine Mourcet
Fréderic Coin
Wim Vermeulen
Pierre-Olivier Mari
Giuseppina Giglia-Mari
Université Toulouse III - Paul Sabatier · FRCentre National de la Recherche Scientifique · FRErasmus MC · NLInstitut de génétique et de biologie moléculaire et cellulaire · FRInstitut de Pharmacologie et de Biologie Structurale · FRUniversité Fédérale de Toulouse Midi-Pyrénées · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleotide excision repair (NER) is a precisely coordinated process essential to avoid DNA damage-induced cellular malfunction and mutagenesis. Here, we investigate the mechanistic details and effects of the NER machinery when it is compromised by a pathologically significant mutation in a subunit of the repair/transcription factor TFIIH, namely XPD. In contrast to previous studies, we find that no single- or double-strand DNA breaks are produced at early time points after UV irradiation of cells bearing a specific XPD mutation, despite the presence of a clear histone H2AX phosphorylation (γH2AX) signal in the UV-exposed areas. We show that the observed γH2AX signal can be explained by the presence of longer single-strand gaps possibly generated by strand displacement. Our in vivo measurements also indicate a strongly reduced TFIIH-XPG binding that could promote single-strand displacement at the site of UV lesions. This finding not only highlights the crucial role of XPG's interactions with TFIIH for proper NER, but also sheds new light on how a faulty DNA repair process can induce extreme genomic instability in human patients.

Indexed as

DNA RepairAnimalsCell LineDNA-Binding ProteinsDNA DamageDNA Excision Repair Protein ERCC-5DNA, Single-StrandedEndonucleasesHumansMiceMice, TransgenicMutationNuclear ProteinsTranscription FactorsUltraviolet RaysXeroderma Pigmentosum Group D ProteinDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5DNA, Single-StrandedEndonucleasesErcc2 protein, mouseNuclear ProteinsTranscription FactorsXeroderma Pigmentosum Group D Protein

Identifiers

PMID22863773
PMCPMC3433779
OpenAlexW2125757091

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.