Evidence map›Paper›PMID 22863562›Full record

Trial reportClinical and investigative medicine. Medecine clinique et experimentale2012

PNPLA3 polymorphisms and liver aminotransferase levels in a Mexican American population.

Quan Li, Hui-Qi Qu, Anne R Rentfro, Megan L Grove, Shaper Mirza, Yang Lu, Craig L Hanis, Michael B Fallon, Eric Boerwinkle, Susan P Fisher-Hoch and 1 more

Open access · bronzeAbstract readRandomized Controlled Trial
In one paragraph

Trial report in Clinical and investigative medicine. Medecine clinique et experimentale, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Genetic Risk of MASLD in Mongolians: Role ofCurrent issues in molecular biology · 2025
    Article
  4. PNPLA3 I148M Interacts With Environmental Triggers to Cause Human Disease.Liver international : official journal of the International Association for the Study of the Liver · 2025
    Review
  5. Sex-specific effects of PNPLA3 I148M.Liver international : official journal of the International Association for the Study of the Liver · 2025
    Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Nutrients · 2021
    Article
  14. Review
  15. Article
  16. World journal of clinical cases · 2018
    Article
  17. Pathways and mechanisms linking dietary components to cardiometabolic disease: thinking beyond calories.Obesity reviews : an official journal of the International Association for the Study of Obesity · 2018
    Review
  18. Article
  19. Journal of diabetes research · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Quan LiThe University of Texas School of Public Health, Brownsville, TX 78520, USA.
Hui-Qi Qu
Anne R Rentfro
Megan L Grove
Shaper Mirza
Yang Lu
Craig L Hanis
Michael B Fallon
Eric Boerwinkle
Susan P Fisher-Hoch
Joseph B McCormick
The University of Texas Health Science Center at Houston · USBrownsville Public Library · USMontreal Children's Hospital · CA

Funding

U OF TEXAS HLTH SCI CTR HOUSTON CENTER FOR CLINICAL AND TRANSLATIONAL SCIENCESUL1RR024148 · NCRR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MCPHERSON, DAVID D · 2006 to 2010
$27.9M
TU SALUD SI CUENTA: A COMMUNITY BASED MEDIA INTERVENTION FOR MEXICAN AMERICANP20MD000170 · NIMHD · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI KELDER, STEVEN HAROLD · 2003 to 2012
$13.1M
CTSA: K12 COMPONENTKL2RR024149 · NCRR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MCPHERSON, DAVID D · 2006 to 2011
$6.7M
MEDIATORS OF PULMONARY VASODILATATION IN LIVER DISEASER01DK056804 · NIDDK · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI FALLON, MICHAEL B · 2000 to 2013
$3.6M
NCRR NIH HHS 1U54RR023417-01NCRR NIH HHS KL2 RR024149NCRR NIH HHS UL1 RR024148NIDDK NIH HHS R01 DK056804NIMHD NIH HHS P20 MD000170
6 · The paper itself

Abstract

purposeThis study examined genetic associations of patatin-like phospholipase domain containing 3 gene (PNPLA3) polymorphisms and liver aminotransferases in an extensively documented, randomly recruited Mexican American population at high risk of liver disease.

methodsTwo single nucleotide polymorphisms (SNP) in the PNPLA3 gene (i.e., rs738409 and rs2281135) were genotyped in 1532 individuals. Population stratification was corrected by the genotyping of 103 ancestry informative markers (AIMs) for Mexican Americans.

resultsBoth PNPLA3 SNPs showed highly significant association with alanine aminotransferase (ALT) levels, but was also, in males, associated with aspartate aminotransferase (AST) levels. Haplotypic association test of the two SNPs suggested stronger genetic association with rs738409 than rs2281135. Obvious sex effects were observed: rs738409-sex interaction in ALT levels P = 8.37 x 10(-4); rs738409-sex interaction in AST levels P = 5.03 x 10(-3).

conclusionsThis population study highlights a sex-specific association of PNPLA3 polymorphisms and elevated liver enzymes in a population-based study, independent of common pathological factors of the metabolic syndrome. The strong genetic association found in women ≤ 50 years old, but not in women > 50 years old, suggests that sex hormones may mediate the sex effect.

Indexed as

Polymorphism, Single NucleotideSex CharacteristicsAcyltransferasesAdultAge FactorsAlanine TransaminaseAspartate AminotransferasesFemaleGenotypeHumansLipaseLiverLiver DiseasesMaleMembrane ProteinsMetabolic SyndromeAcyltransferasesAlanine TransaminaseAspartate AminotransferasesLipaseMembrane ProteinsPhospholipases A2, Calcium-IndependentPNPLA3 protein, human

Identifiers

PMID22863562
PMCPMC3441048
OpenAlexW1568895851

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.