Evidence map›Paper›PMID 22863192›Full record

ArticleAmerican journal of human genetics2012

Rare de novo germline copy-number variation in testicular cancer.

Zsofia K Stadler, Diane Esposito, Sohela Shah, Joseph Vijai, Boris Yamrom, Dan Levy, Yoon-Ha Lee, Jude Kendall, Anthony Leotta, Michael Ronemus and 15 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Testicular Cancer: Genes, Environment, Hormones.Frontiers in endocrinology · 2019
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Copy number polymorphism in plant genomes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014
    Review
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 4 institutions in 1 country.

Zsofia K StadlerDepartment of Medicine, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.
Diane Esposito
Sohela Shah
Joseph Vijai
Boris Yamrom
Dan Levy
Yoon-Ha Lee
Jude Kendall
Anthony Leotta
Michael Ronemus
Nichole Hansen
Kara Sarrel
Rohini Rau-Murthy
Kasmintan Schrader
Noah Kauff
Robert J Klein
Steven M Lipkin
Rajmohan Murali
Mark Robson
Joel Sheinfeld
Darren Feldman
George Bosl
Larry Norton
Michael Wigler
Kenneth Offit
Memorial Sloan Kettering Cancer Center · USCold Spring Harbor Laboratory · USKettering University · USCornell University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although heritable factors are an important determinant of risk of early-onset cancer, the majority of these malignancies appear to occur sporadically without identifiable risk factors. Germline de novo copy-number variations (CNVs) have been observed in sporadic neurocognitive and cardiovascular disorders. We explored this mechanism in 382 genomes of 116 early-onset cancer case-parent trios and unaffected siblings. Unique de novo germline CNVs were not observed in 107 breast or colon cancer trios or controls but were indeed found in 7% of 43 testicular germ cell tumor trios; this percentage exceeds background CNV rates and suggests a rare de novo genetic paradigm for susceptibility to some human malignancies.

Indexed as

AdultDNA Copy Number VariationsGenetic Predisposition to DiseaseGenomicsGerm-Line MutationHumansMaleParentsResearch DesignTesticular Neoplasms

Identifiers

PMID22863192
PMCPMC3415553
OpenAlexW2078045978

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.