Evidence map›Paper›PMID 22861177›Full record

ArticleThe journal of physical chemistry. B2012

Pressure-induced changes in the fluorescence behavior of red fluorescent proteins.

Eric A Pozzi, Linda R Schwall, Ralph Jimenez, J Mathias Weber

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Eric A PozziJILA, NIST and Department of Chemistry and Biochemistry, University of Colorado , Boulder, Colorado 80309-0440, United States.
Linda R Schwall
Ralph Jimenez
J Mathias Weber

Funding

Microfluidics-based Selections for the Optimization of Red Fluorescent ProteinsR01GM083849 · NIGMS · UNIVERSITY OF COLORADO · PI JIMENEZ, RALPH, PALMER, AMY E · 2008 to 2011
$1.5M
NIGMS NIH HHS GM083849NIGMS NIH HHS R01 GM083849
6 · The paper itself

Abstract

We present an experimental study on the fluorescence behavior of the red fluorescent proteins TagRFP-S, TagRFP-T, mCherry, mOrange2, mStrawberry, and mKO as a function of pressure up to several GPa. TagRFP-S, TagRFP-T, mOrange2, and mStrawberry show an initial increase in fluorescence intensity upon application of pressure above ambient conditions. At higher pressures, the fluorescence intensity decreases dramatically for all proteins under study, probably due to denaturing of the proteins. Small blue shifts in the fluorescence spectra with increasing pressure were seen in all proteins under study, hinting at increased rigidity of the chromophore environment. In addition, mOrange2 and mStrawberry exhibit strong and abrupt changes in their fluorescence spectra at certain pressures. These changes are likely due to structural modifications of the hydrogen bonding environment of the chromophore. The strong differences in behavior between proteins with identical or very similar chromophores highlight how the chromophore environment contributes to pressure-induced behavior of the fluorescence performance.

Indexed as

FluorescenceLuminescent ProteinsModels, MolecularMolecular StructurePressureRed Fluorescent ProteinSpectrometry, FluorescenceLuminescent ProteinsRed Fluorescent Protein

Identifiers

PMID22861177
PMCPMC4022145

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.