Evidence map›Paper›PMID 22860099›Full record

ArticlePloS one2012

Differential proteomic analysis of noncardia gastric cancer from individuals of northern Brazil.

Mariana Ferreira Leal, Janete Chung, Danielle Queiroz Calcagno, Paulo Pimentel Assumpção, Samia Demachki, Ismael Dale Cotrim Guerreiro da Silva, Roger Chammas, Rommel Rodríguez Burbano, Marília de Arruda Cardoso Smith

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

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  7. Menadione reducesTherapeutic advances in gastroenterology · 2020
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  8. Impact of proteomics investigations on gastric cancer treatment and diagnosis.Gastroenterology and hepatology from bed to bench · 2019
    Review
  9. Review
  10. Article
  11. What gastric cancer proteomic studies show about gastric carcinogenesis?Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Review
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Mariana Ferreira LealGenetics Division, Department of Morphology and Genetic, Federal University of São Paulo, São Paulo, Brazil. mariana.morf@epm.br
Janete Chung
Danielle Queiroz Calcagno
Paulo Pimentel Assumpção
Samia Demachki
Ismael Dale Cotrim Guerreiro da Silva
Roger Chammas
Rommel Rodríguez Burbano
Marília de Arruda Cardoso Smith
Universidade Federal de São Paulo · BRUniversidade Federal do Pará · BRUniversidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gastric cancer is the second leading cause of cancer-related death worldwide. The identification of new cancer biomarkers is necessary to reduce the mortality rates through the development of new screening assays and early diagnosis, as well as new target therapies. In this study, we performed a proteomic analysis of noncardia gastric neoplasias of individuals from Northern Brazil. The proteins were analyzed by two-dimensional electrophoresis and mass spectrometry. For the identification of differentially expressed proteins, we used statistical tests with bootstrapping resampling to control the type I error in the multiple comparison analyses. We identified 111 proteins involved in gastric carcinogenesis. The computational analysis revealed several proteins involved in the energy production processes and reinforced the Warburg effect in gastric cancer. ENO1 and HSPB1 expression were further evaluated. ENO1 was selected due to its role in aerobic glycolysis that may contribute to the Warburg effect. Although we observed two up-regulated spots of ENO1 in the proteomic analysis, the mean expression of ENO1 was reduced in gastric tumors by western blot. However, mean ENO1 expression seems to increase in more invasive tumors. This lack of correlation between proteomic and western blot analyses may be due to the presence of other ENO1 spots that present a slightly reduced expression, but with a high impact in the mean protein expression. In neoplasias, HSPB1 is induced by cellular stress to protect cells against apoptosis. In the present study, HSPB1 presented an elevated protein and mRNA expression in a subset of gastric cancer samples. However, no association was observed between HSPB1 expression and clinicopathological characteristics. Here, we identified several possible biomarkers of gastric cancer in individuals from Northern Brazil. These biomarkers may be useful for the assessment of prognosis and stratification for therapy if validated in larger clinical study sets.

Indexed as

ProteomicsAdultAgedAged, 80 and overBiomarkers, TumorBrazilCluster AnalysisDNA-Binding ProteinsElectrophoresis, Gel, Two-DimensionalFemaleHeat-Shock ProteinsHSP27 Heat-Shock ProteinsHumansMaleMiddle AgedMolecular ChaperonesBiomarkers, TumorDNA-Binding ProteinsENO1 protein, humanHeat-Shock ProteinsHSP27 Heat-Shock ProteinsHSPB1 protein, humanMolecular ChaperonesPhosphopyruvate HydrataseTumor Suppressor Proteins

Identifiers

PMID22860099
PMCPMC3408468
OpenAlexW1973265324

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.