Evidence map›Paper›PMID 22855483›Full record

ArticleJournal of virology2012

Cryo-electron tomography of rubella virus.

Anthony J Battisti, Joshua D Yoder, Pavel Plevka, Dennis C Winkler, Vidya Mangala Prasad, Richard J Kuhn, Teryl K Frey, Alasdair C Steven, Michael G Rossmann

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. The Density Code for the Development of a Vaccine?Journal of pharmaceutical sciences · 2016
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Rubella.Lancet (London, England) · 2015
    Review
  16. Viral membrane fusion.Virology · 2015
    Review
  17. Article
  18. Article
  19. Review
  20. Rubella virus capsid protein structure and its role in virus assembly and infection.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Anthony J BattistiDepartment of Biological Sciences, Purdue University, West Lafayette, Indiana, USA.
Joshua D Yoder
Pavel Plevka
Dennis C Winkler
Vidya Mangala Prasad
Richard J Kuhn
Teryl K Frey
Alasdair C Steven
Michael G Rossmann
Purdue University West Lafayette · USGeorgia State University · USNational Institute of Arthritis and Musculoskeletal and Skin Diseases · USNational Institutes of Health · US

Funding

Structural Biology Of Virus AssemblyZIAAR027002 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI WINGFIELD, PAUL T · 2009 to 2024
$19.2M
Structural Studies of TogavirusesR01AI095366 · NIAID · PURDUE UNIVERSITY · PI KUHN, RICHARD J. · 2012 to 2023
$6.8M
BIOPHYS STUD OF PROTEINS, NUCLEIC ACIDS, AND VIRUSEST32GM008296 · NIGMS · PURDUE UNIVERSITY WEST LAFAYETTE · PI STAUFFACHER, CYNTHIA VIANNE · 1989 to 2012
$2.2M
MOLECULAR BIOLOGY OF RUBELLA VIRUSR01AI021389 · NIAID · GEORGIA STATE UNIVERSITY · PI FREY, TERYL K · 1987 to 2006
$1.7M
MOLECULAR BIOLOGY OF RUBELLA VIRUSR23AI021389 · NIAID · GEORGIA STATE UNIVERSITY · PI FREY, TERYL K · 1985 to 1986
–
Intramural NIH HHS ZIA AR027002NIAID NIH HHS AI095366NIAID NIH HHS AI21389NIAID NIH HHS R01 AI021389NIAID NIH HHS R01 AI095366NIGMS NIH HHS T32 GM008296NIGMS NIH HHS T32 GM008296-20
6 · The paper itself

Abstract

Rubella virus is the only member of the Rubivirus genus within the Togaviridae family and is the causative agent of the childhood disease known as rubella or German measles. Here, we report the use of cryo-electron tomography to examine the three-dimensional structure of rubella virions and compare their structure to that of Ross River virus, a togavirus belonging the genus Alphavirus. The ectodomains of the rubella virus glycoproteins, E1 and E2, are shown to be organized into extended rows of density, separated by 9 nm on the viral surface. We also show that the rubella virus nucleocapsid structure often forms a roughly spherical shell which lacks high density at its center. While many rubella virions are approximately spherical and have dimensions similar to that of the icosahedral Ross River virus, the present results indicate that rubella exhibits a large degree of pleomorphy. In addition, we used rotation function calculations and other analyses to show that approximately spherical rubella virions lack the icosahedral organization which characterizes Ross River and other alphaviruses. The present results indicate that the assembly mechanism of rubella virus, which has previously been shown to differ from that of the alphavirus assembly pathway, leads to an organization of the rubella virus structural proteins that is different from that of alphaviruses.

Indexed as

AnimalsCapsid ProteinsCell LineChlorocebus aethiopsCryoelectron MicroscopyElectron Microscope TomographyFreezingGlycoproteinsMembrane GlycoproteinsNucleocapsidRoss River virusRubellaRubella virusVero CellsViral Envelope ProteinsVirus AssemblyCapsid ProteinsE1 envelope protein, Rubella virusE1 protein, Ross River virusE2 envelope protein, Rubella virusE2 protein, Ross River virusGlycoproteinsMembrane GlycoproteinsViral Envelope Proteins

Identifiers

PMID22855483
PMCPMC3457135
OpenAlexW2110559960

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.