Evidence map›Paper›PMID 22853952›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

A microRNA network regulates expression and biosynthesis of wild-type and DeltaF508 mutant cystic fibrosis transmembrane conductance regulator.

Shyam Ramachandran, Philip H Karp, Peng Jiang, Lynda S Ostedgaard, Amy E Walz, John T Fisher, Shaf Keshavjee, Kim A Lennox, Ashley M Jacobi, Scott D Rose and 4 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
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  6. Article
  7. Review
  8. Article
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  12. Article
  13. Review
  14. Revisiting CFTR Interactions: Old Partners and New Players.International journal of molecular sciences · 2021
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. The Multifaceted Roles of MicroRNAs in Cystic Fibrosis.Diagnostics (Basel, Switzerland) · 2020
    Review

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Shyam RamachandranDepartment of Pediatrics, Interdisciplinary Program in Genetics, Carver College of Medicine, University of Iowa, Iowa City, IA 52242, USA.
Philip H Karp
Peng Jiang
Lynda S Ostedgaard
Amy E Walz
John T Fisher
Shaf Keshavjee
Kim A Lennox
Ashley M Jacobi
Scott D Rose
Mark A Behlke
Michael J Welsh
Yi Xing
Paul B McCray

Funding

Vector CoreP01HL051670 · NHLBI · UNIVERSITY OF IOWA · PI MCCRAY, PAUL B · 1993 to 2019
$36.5M
Respiratory virus infection in early cystic fibrosis lung diseaseP01HL091842 · NHLBI · UNIVERSITY OF IOWA · PI STOLTZ, DAVID A · 2008 to 2022
$34.2M
Vector Core-Core 2P30DK054759 · NIDDK · UNIVERSITY OF IOWA · PI Alejandro Antonio Pezzulo · 1998 to 2026
$30.5M
Allele-Specific Repair of the CFTR DeltaF508 Mutation using Zinc Finger NucleasesR21HL091808 · NHLBI · UNIVERSITY OF IOWA · PI MCCRAY, PAUL B · 2008 to 2009
$460k
Howard Hughes Medical InstituteNHLBI NIH HHS P01 HL051670NHLBI NIH HHS P01 HL-091842NHLBI NIH HHS P01 HL091842NHLBI NIH HHS P01 HL-51670NHLBI NIH HHS R21 HL091808NHLBI NIH HHS R21 HL-91808NIDDK NIH HHS P30 DK-054759NIDDK NIH HHS P30 DK054759NIDDK NIH HHS P30 DK-54759
6 · The paper itself

Abstract

Production of functional proteins requires multiple steps, including gene transcription and posttranslational processing. MicroRNAs (miRNAs) can regulate individual stages of these processes. Despite the importance of the cystic fibrosis transmembrane conductance regulator (CFTR) channel for epithelial anion transport, how its expression is regulated remains uncertain. We discovered that miRNA-138 regulates CFTR expression through its interactions with the transcriptional regulatory protein SIN3A. Treating airway epithelia with an miR-138 mimic increased CFTR mRNA and also enhanced CFTR abundance and transepithelial Cl(-) permeability independent of elevated mRNA levels. An miR-138 anti-miR had the opposite effects. Importantly, miR-138 altered the expression of many genes encoding proteins that associate with CFTR and may influence its biosynthesis. The most common CFTR mutation, ΔF508, causes protein misfolding, protein degradation, and cystic fibrosis. Remarkably, manipulating the miR-138 regulatory network also improved biosynthesis of CFTR-ΔF508 and restored Cl(-) transport to cystic fibrosis airway epithelia. This miRNA-regulated network directs gene expression from the chromosome to the cell membrane, indicating that an individual miRNA can control a cellular process more broadly than recognized previously. This discovery also provides therapeutic avenues for restoring CFTR function to cells affected by the most common cystic fibrosis mutation.

Indexed as

Gene Expression RegulationBiological TransportChloridesCystic Fibrosis Transmembrane Conductance RegulatorEpitheliumGene Expression ProfilingGene Regulatory NetworksHeLa CellsHumansLungMicroRNAsProtein Processing, Post-TranslationalRepressor ProteinsSin3 Histone Deacetylase and Corepressor ComplexChloridesCystic Fibrosis Transmembrane Conductance Regulatorcystic fibrosis transmembrane conductance regulator delta F508MicroRNAsMIRN138 microRNA, humanRepressor ProteinsSIN3A transcription factorSin3 Histone Deacetylase and Corepressor Complex

Identifiers

PMID22853952
PMCPMC3421220

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.