Evidence map›Paper›PMID 22848450›Full record

ArticlePloS one2012

Detecting the immune system response of a 500 year-old Inca mummy.

Angelique Corthals, Antonius Koller, Dwight W Martin, Robert Rieger, Emily I Chen, Mario Bernaski, Gabriella Recagno, Liliana M Dávalos

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Paleoproteomics.Chemical reviews · 2022
    Review
  3. Review
  4. Article
  5. Proteomic profiling of archaeological human bone.Royal Society open science · 2017
    Article
  6. Resurrecting the Dead (Molecules).Computational and structural biotechnology journal · 2017
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Ancient human microbiomes.Journal of human evolution · 2015
    Article
  12. A new era in palaeomicrobiology: prospects for ancient dental calculus as a long-term record of the human oral microbiome.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015
    Review
  13. Review
  14. Article
  15. Archaeological, radiological, and biological evidence offer insight into Inca child sacrifice.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Angelique CorthalsDepartment of Sciences, John Jay College of Criminal Justice, City University of New York, New York, New York, United States of America. aspcorthals@gmail.com
Antonius Koller
Dwight W Martin
Robert Rieger
Emily I Chen
Mario Bernaski
Gabriella Recagno
Liliana M Dávalos

Funding

Acquisition of a Thermo Scientific Orbitrap XL Hybrid FT Mass SpectrometerS10RR025072 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI IDEN, CHARLES R · 2008 to 2008
$851k
NCRR NIH HHS 1S10RR025072-1NCRR NIH HHS S10 RR025072
6 · The paper itself

Abstract

Disease detection in historical samples currently relies on DNA extraction and amplification, or immunoassays. These techniques only establish pathogen presence rather than active disease. We report the first use of shotgun proteomics to detect the protein expression profile of buccal swabs and cloth samples from two 500-year-old Andean mummies. The profile of one of the mummies is consistent with immune system response to severe pulmonary bacterial infection at the time of death. Presence of a probably pathogenic Mycobacterium sp. in one buccal swab was confirmed by DNA amplification, sequencing, and phylogenetic analyses. Our study provides positive evidence of active pathogenic infection in an ancient sample for the first time. The protocol introduced here is less susceptible to contamination than DNA-based or immunoassay-based studies. In scarce forensic samples, shotgun proteomics narrows the range of pathogens to detect using DNA assays, reducing cost. This analytical technique can be broadly applied for detecting infection in ancient samples to answer questions on the historical ecology of specific pathogens, as well as in medico-legal cases when active pathogenic infection is suspected.

Indexed as

Indians, South AmericanMummiesFemaleHumansMaleMycobacteriumMycobacterium Infections

Identifiers

PMID22848450
PMCPMC3405130

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.