Evidence map›Paper›PMID 22847450›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences.

Mihaela Maria Martis, Sonja Klemme, Ali Mohammad Banaei-Moghaddam, Frank R Blattner, Jiří Macas, Thomas Schmutzer, Uwe Scholz, Heidrun Gundlach, Thomas Wicker, Hana Šimková and 10 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 123 papers.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed.

  1. Article
  2. Review
  3. B chromosomes put the 'super' in supernumerary.Trends in genetics : TIG · 2026
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. First Update to B-Chrom: A Database on B-Chromosomes.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  17. Flow Cytometric Analysis and Sorting of Plant Chromosomes.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  18. Rye B chromosomes differently influence the expression of A chromosome-encoded genes depending on the host species.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2022
    Article
  19. Article
  20. The non-Mendelian behavior of plant B chromosomes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2022
    Review

63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Mihaela Maria MartisInstitute of Bioinformatics and Systems Biology, German Research Center for Environmental Health, 85764 Neuherberg, Germany.
Sonja Klemme
Ali Mohammad Banaei-Moghaddam
Frank R Blattner
Jiří Macas
Thomas Schmutzer
Uwe Scholz
Heidrun Gundlach
Thomas Wicker
Hana Šimková
Petr Novák
Pavel Neumann
Marie Kubaláková
Eva Bauer
Grit Haseneyer
Jörg Fuchs
Jaroslav Doležel
Nils Stein
Klaus F X Mayer
Andreas Houben

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Supernumerary B chromosomes are optional additions to the basic set of A chromosomes, and occur in all eukaryotic groups. They differ from the basic complement in morphology, pairing behavior, and inheritance and are not required for normal growth and development. The current view is that B chromosomes are parasitic elements comparable to selfish DNA, like transposons. In contrast to transposons, they are autonomously inherited independent of the host genome and have their own mechanisms of mitotic or meiotic drive. Although B chromosomes were first described a century ago, little is known about their origin and molecular makeup. The widely accepted view is that they are derived from fragments of A chromosomes and/or generated in response to interspecific hybridization. Through next-generation sequencing of sorted A and B chromosomes, we show that B chromosomes of rye are rich in gene-derived sequences, allowing us to trace their origin to fragments of A chromosomes, with the largest parts corresponding to rye chromosomes 3R and 7R. Compared with A chromosomes, B chromosomes were also found to accumulate large amounts of specific repeats and insertions of organellar DNA. The origin of rye B chromosomes occurred an estimated ∼1.1-1.3 Mya, overlapping in time with the onset of the genus Secale (1.7 Mya). We propose a comprehensive model of B chromosome evolution, including its origin by recombination of several A chromosomes followed by capturing of additional A-derived and organellar sequences and amplification of B-specific repeats.

Indexed as

Evolution, MolecularMosaicismBase SequenceCentromereChromosomes, PlantGenes, PlantGenome, PlantIn Situ Hybridization, FluorescenceMetaphaseModels, GeneticOrganellesRetroelementsSecaleRetroelements

Identifiers

PMID22847450
PMCPMC3421217

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.