Evidence map›Paper›PMID 22847407›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Naturally evolved G protein-coupled receptors adopt metastable conformations.

Kuang-Yui Michael Chen, Fuguo Zhou, Bartlomiej G Fryszczyn, Patrick Barth

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. State-Targeting Stabilization of Adenosine AInternational journal of molecular sciences · 2021
    Article
  5. Membrane Protein Engineering with Rosetta.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  6. Structural cavities are critical to balancing stability and activity of a membrane-integral enzyme.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  7. The metastable states of proteins.Protein science : a publication of the Protein Society · 2020
    Review
  8. Review
  9. Article
  10. Tailor-made GPCRs.Nature chemical biology · 2020
    Article
  11. Article
  12. Reprogramming G protein coupled receptor structure and function.Current opinion in structural biology · 2018
    Review
  13. Article
  14. Computational design of membrane proteins using RosettaMembrane.Protein science : a publication of the Protein Society · 2018
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. How Can Mutations Thermostabilize G-Protein-Coupled Receptors?Trends in pharmacological sciences · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kuang-Yui Michael ChenVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.
Fuguo Zhou
Bartlomiej G Fryszczyn
Patrick Barth
Baylor College of Medicine · US

Funding

HOUSTON AREA MOLECULAR BIOPHYSICS TRAINING PROGRAMT32GM008280 · NIGMS · RICE UNIVERSITY · PI WENSEL, THEODORE G · 1988 to 2023
$8.0M
NIGMS NIH HHS T32 GM008280NIGMS NIH HHS T32GM008280
6 · The paper itself

Abstract

A wide range of membrane receptors signal through conformational changes, and the resulting protein conformational flexibility often hinders their structural studies. Because the determinants of membrane receptor conformational stability are still poorly understood, identifying a minimal set of perturbations stabilizing a membrane protein in a given conformation remains a major challenge in membrane protein structure determination. We present a novel approach integrating bioinformatics, computational design and experimental techniques that identifies and stabilizes metastable receptor regions. When applied to the beta1-adrenergic receptor, the method generated 13 novel receptor variants stabilized in the intended inactive state among which two exhibit an apparent thermostability higher than WT and M23 (a receptor variant previously stabilized by extensive scanning mutagenesis) by more than 30 °C and 11 °C, respectively. Targeted regions involve nonconserved unsatisfied polar residues or exhibit significant packing defects, features found in all class A G protein-coupled receptor structures. These findings suggest that natural G protein-coupled receptor sequences have evolved to be conformationally metastable through the design of suboptimal polar and van der Waals tertiary interactions. Given sufficiently accurate structural models, our approach should prove useful for designing stabilized variants of many uncharacterized membrane receptors.

Indexed as

Evolution, MolecularAmino Acid MotifsAmino AcidsAmino Acid SubstitutionConserved SequenceModels, MolecularMutant ProteinsMutationProtein ConformationProtein StabilityReceptors, Adrenergic, beta-1Receptors, G-Protein-CoupledSignal TransductionSurface PropertiesThermodynamicsAmino AcidsMutant ProteinsReceptors, Adrenergic, beta-1Receptors, G-Protein-Coupled

Identifiers

PMID22847407
PMCPMC3421219
OpenAlexW2034736596

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.