Evidence map›Paper›PMID 22845480›Full record

ReviewExpert review of molecular diagnostics2012

Personalized medicine and pharmacogenetic biomarkers: progress in molecular oncology testing.

Frank S Ong, Kingshuk Das, Jay Wang, Hana Vakil, Jane Z Kuo, Wendell-Lamar B Blackwell, Stephen W Lim, Mark O Goodarzi, Kenneth E Bernstein, Jerome I Rotter and 1 more

Open access · greenAbstract readReview
In one paragraph

Review in Expert review of molecular diagnostics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 95 citations in OpenAlex.

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  20. The mathematical limits of genetic prediction for complex chronic disease.Journal of epidemiology and community health · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Frank S OngDepartment of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA. frank.ong@cshs.org
Kingshuk Das
Jay Wang
Hana Vakil
Jane Z Kuo
Wendell-Lamar B Blackwell
Stephen W Lim
Mark O Goodarzi
Kenneth E Bernstein
Jerome I Rotter
Wayne W Grody
Cedars-Sinai Medical Center · USUniversity of California, Los Angeles · USPinnacle Oncology Hematology · USUniversity of California System · US

Funding

UCLA Clinical and Translational Science InstituteUL1TR000124 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2012 to 2015
$57.0M
Site-specific ACE Knockout Mice and Bleomycin-Induced Lung InjuryF32HL105036 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI ONG, FRANK SHIH-CHANG · 2011 to 2012
$103k
NCATS NIH HHS UL1 TR000124NHLBI NIH HHS F32 HL105036
6 · The paper itself

Abstract

In the field of oncology, clinical molecular diagnostics and biomarker discoveries are constantly advancing as the intricate molecular mechanisms that transform a normal cell into an aberrant state in concert with the dysregulation of alternative complementary pathways are increasingly understood. Progress in biomarker technology, coupled with the companion clinical diagnostic laboratory tests, continue to advance this field, where individualized and customized treatment appropriate for each individual patient define the standard of care. Here, we discuss the current commonly used predictive pharmacogenetic biomarkers in clinical oncology molecular testing: BRAF V600E for vemurafenib in melanoma; EML4-ALK for crizotinib and EGFR for erlotinib and gefitinib in non-small-cell lung cancer; KRAS against the use of cetuximab and panitumumab in colorectal cancer; ERBB2 (HER2/neu) for trastuzumab in breast cancer; BCR-ABL for tyrosine kinase inhibitors in chronic myeloid leukemia; and PML/RARα for all-trans-retinoic acid and arsenic trioxide treatment for acute promyelocytic leukemia.

Indexed as

Precision MedicineAntineoplastic AgentsBiomarkers, TumorGenetic TestingHumansMolecular Diagnostic TechniquesMutationNeoplasmsAntineoplastic AgentsBiomarkers, Tumor

Identifiers

PMID22845480
PMCPMC3495985
OpenAlexW2143119140

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.