Evidence map›Paper›PMID 22844406›Full record

ArticlePloS one2012

ADP ribosylation by PARP-1 suppresses HOXB7 transcriptional activity.

Xinyan Wu, Stephan Ellmann, Ethel Rubin, Minchan Gil, Kideok Jin, Liangfeng Han, Hexin Chen, Erika M Kwon, Jianhui Guo, Hyo Chol Ha and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Mechanisms of Specificity for Hox Factor Activity.Journal of developmental biology · 2016
    Article
  6. Review
  7. Review
  8. Transcriptional roles of PARP1 in cancer.Molecular cancer research : MCR · 2014
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Xinyan WuDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America. xinyan@jhmi.edu
Stephan Ellmann
Ethel Rubin
Minchan Gil
Kideok Jin
Liangfeng Han
Hexin Chen
Erika M Kwon
Jianhui Guo
Hyo Chol Ha
Saraswati Sukumar
Johns Hopkins Medicine · USGeorgetown University Medical Center · USJohns Hopkins University · US

Funding

VACCINES--A NEW PARADIGM FOR BREAST CANCERP50CA088843 · NCI · JOHNS HOPKINS UNIVERSITY · PI DAVIDSON, NANCY ELLEN · 2000 to 2010
$27.8M
Role of PARP-1 in Mediating Inflammatory Gene TranscriptionR01AI064706 · NIAID · GEORGETOWN UNIVERSITY · PI JUNG, MITCHELL C · 2006 to 2010
$1.5M
Epigenetic Regulation by Poly(ADP-ribose) in Response to ArseniteR21ES015210 · NIEHS · GEORGETOWN UNIVERSITY · PI JUNG, MITCHELL C · 2006 to 2007
$420k
NCI NIH HHS P50 CA088843NCI NIH HHS P50CA88843NIAID NIH HHS AI64706NIAID NIH HHS R01 AI064706NIEHS NIH HHS ES015210NIEHS NIH HHS R21 ES015210
6 · The paper itself

Abstract

Interactions with cofactors regulate transcriptional activity and also help HOX proteins to achieve the specificity required for transcriptional regulation of target genes. In this study, we describe a novel protein/protein interaction of HOXB7 with poly (ADP-ribose) polymerase-1 (PARP-1) that involves the homeodomain of HOXB7 and the first zinc finger domain of PARP-1. Upon binding to PARP-1, HOXB7 undergoes poly(ADP-ribosyl)altion resulting in a reduction of its transcriptional activity. Since aspartic acid and glutamic acid residues are acceptors of the ADP ribose moiety transferred by PARP-1, deletion of the evolutionarily conserved C-terminal Glu-rich tail of HOXB7 dramatically attenuates ADP-ribosylation of HOXB7 by PARP-1. Further, a mutant of HOXB7 without the Glu-rich tail loses the ability to be negatively regulated by PARP-1 and becomes transcriptionally more active in luciferase reporter assays. Since the homeodomain is highly conserved among HOX proteins, five other HOX proteins were tested. All six showed interaction with, and were poly(ADP-ribosyl)ated by PARP-1. However, among them, this modification altered the DNA binding activity of only HOXA7 and HOXB7. In summary, this study identifies a new interacting partner of HOX proteins. More importantly, this study reveals a novel mechanism whereby polyADP-ribosylation regulates transcriptional activities of HOX proteins such as HOXB7 and HOXA7.

Indexed as

Transcription, GeneticAdenosine Diphosphate RiboseAnimalsBiocatalysisCell LineDNAGlutamic AcidHomeodomain ProteinsHumansPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) PolymerasesProtein Structure, TertiaryTranscriptional ActivationZinc FingersAdenosine Diphosphate RiboseDNAGlutamic AcidHomeodomain ProteinsHOXA7 protein, humanHOXB7 protein, humanPARP1 protein, humanPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerases

Identifiers

PMID22844406
PMCPMC3402478
OpenAlexW2094477451

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.