Evidence map›Paper›PMID 22843243›Full record

ArticlePlanta2012

Proteomics analysis of date palm leaves affected at three characteristic stages of brittle leaf disease.

Besma Sghaier-Hammami, Mohammed Najib Saidi, María Angeles Castillejo, Jesús V Jorrín-Novo, Ahmed Namsi, Noureddine Drira, Radhia Gargouri-Bouzid

Abstract read
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In one paragraph

Article in Planta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 12 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Besma Sghaier-HammamiLaboratoire des Biotechnologies Végétales Appliquées à l'Amélioration des Cultures, Faculté des Sciences de Sfax, Route de Soukra km 4, B.P. 1171, 3018, Sfax, Tunisia. sghaierbesma@yahoo.fr
Mohammed Najib Saidi
María Angeles Castillejo
Jesús V Jorrín-Novo
Ahmed Namsi
Noureddine Drira
Radhia Gargouri-Bouzid
University of Sfax · TNInstitution de la Recherche et de l’Enseignement Supérieur Agricoles · TNUniversity of Córdoba · ESUniversity of Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteomics analysis has been performed in leaf tissue from field date palm trees showing the brittle leaf disease (BLD) or maladie des feuilles cassantes, the main causal agent of the date palm decline in south Tunisia. To study the evolution of the disease, proteins from healthy and affected leaves taken at three disease stages (S1, S2 and S3) were trichloroacetic acid acetone extracted and subjected to two-dimensional gel electrophoresis (5-8 pH range). Statistical analysis showed that the protein abundance profile is different enough to differentiate the affected leaves from the healthy ones. Fifty-eight variable spots were successfully identified by matrix-assisted laser desorption ionization time of flight, 60 % of which corresponded to chloroplastic ones being involved in the photosynthesis electronic chain and ATP synthesis, metabolic pathways implicated in the balance of the energy, and proteases. Changes in the proteome start at early disease stage (S1), and are greatest at S2. In addition to the degradation of the ribulose-1.5-bisphosphate carboxylase oxygenase in affected leaflets, proteins belonging to the photosynthesis electronic chain and ATP synthesis decreased following the disease, reinforcing the relationship between BLD and manganese deficiency. The manganese-stabilizing proteins 33 kDa, identified in the present work, can be considered as protein biomarkers of the disease, especially at early disease step.

Indexed as

ArecaceaeBiomarkersCluster AnalysisElectrophoresis, Gel, Two-DimensionalManganesePlant DiseasesPlant LeavesPlant ProteinsProteomicsRibulose-Bisphosphate CarboxylaseSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTunisiaBiomarkersManganesePlant ProteinsRibulose-Bisphosphate Carboxylase

Identifiers

PMID22843243
OpenAlexW2011997729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.