Evidence map›Paper›PMID 22843012›Full record

ArticleInflammation2012

Prediction of novel genes associated with negative regulators of toll-like receptors-induced inflammation based on endotoxin tolerance.

Yan Yang, Hanxiao Sun, Xuemei Mo, Yi Liu, Hongwei Jia, Xiuying Li, Guang Zhang, Qin Li

Abstract read
PubMed Publisher
In one paragraph

Article in Inflammation, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Differences in the Genomic Profiles of Immunoparalyzed and Nonimmunoparalyzed Children With Sepsis: A Pilot Study.Pediatric critical care medicine : a journal of the Society of Critical Care Medicine and the World Federation of Pediatric Intensive and Critical Care Societies · 2022
    Observational
  2. Review
  3. Article
  4. DNA microarray-based gene expression profiling of estrogenic chemicals.Cellular and molecular life sciences : CMLS · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yan YangInstitute of Genomic Medicine Research, College of Pharmacy, Jinan University, Guangzhou 510632, People's Republic of China.
Hanxiao Sun
Xuemei Mo
Yi Liu
Hongwei Jia
Xiuying Li
Guang Zhang
Qin Li
Jinan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prior exposure of innate immune cells to lipopolysaccharide (LPS) has caused them to be refractory to further endotoxin stimulation, also termed endotoxin tolerance (ET). Bacterial LPS signals through Toll-like receptor (TLR) 4, which was thought to enable the innate immune system to deal with invasive pathogens and to restrain systemic inflammation efficiently. We established a robust model of ET and determined the level of TNF-α and IL-6 in cultured human monocytes. Then, microarray assay was applied to assess gene expression in this model. The results showed that 356 non-tolerizable genes were differentially expressed at a high level in tolerant monocytes. The genes selected were classified into several categories based on gene ontology (GO) and KEGG pathway database. And then literature annotations, protein-protein interaction (PPI) network, and functional consistency were applied to analyze the non-tolerizable genes. Finally, the microarray results were verified by quantitative real-time PCR of seven representative genes, including the two candidate genes, Spry2 and Smurf2, which were supposed to play a critical role in TLRs-induced inflammation based on literature retrieval. Our results would provide useful information for further analysis of regulating TLRs-induced inflammation, and would facilitate the study of associated mechanisms.

Indexed as

Adaptor Proteins, Signal TransducingCells, CulturedEndotoxinsGene ExpressionGene Expression ProfilingHumansInflammationInterleukin-6Intracellular Signaling Peptides and ProteinsLeukocytes, MononuclearMembrane ProteinsProtein Serine-Threonine KinasesSignal TransductionToll-Like Receptor 4Tumor Necrosis Factor-alphaUbiquitin-Protein LigasesAdaptor Proteins, Signal TransducingEndotoxinsInterleukin-6Intracellular Signaling Peptides and ProteinsMembrane ProteinsProtein Serine-Threonine KinasesSmurf2 protein, mouseSpry2 protein, mouseTlr4 protein, mouseToll-Like Receptor 4Tumor Necrosis Factor-alphaUbiquitin-Protein Ligases

Identifiers

PMID22843012
OpenAlexW1963899136

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.