Evidence map›Paper›PMID 22841870›Full record

ArticleFree radical biology & medicine2012

Nuclear depletion of apurinic/apyrimidinic endonuclease 1 (Ape1/Ref-1) is an indicator of energy disruption in neurons.

Shilpee Singh, Ella W Englander

Open access · greenAbstract read
In one paragraph

Article in Free radical biology & medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
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  8. An in vitro study ascertaining the role of HMetabolic brain disease · 2017
    Article
  9. Review
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  11. APE1/Ref-1 facilitates recovery of gray and white matter and neurological function after mild stroke injury.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Shilpee SinghDepartment of Surgery, University of Texas Medical Branch, 301 University Boulevard, Galveston, TX 77555, USA.
Ella W Englander
The University of Texas Medical Branch at Galveston · US

Funding

HYPOXIA-INDUCED DNA DAMAGE AND REPAIR IN THE RAT BRAINR01NS039449 · NINDS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI ENGLANDER, ELLA W · 2000 to 2010
$2.9M
Mechanisms of Neurotoxicity of Combustion-smoke Inhalation to the BrainR01ES014613 · NIEHS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI ENGLANDER, ELLA W · 2007 to 2012
$1.7M
NIEHS NIH HHS ES014613NIEHS NIH HHS R01 ES014613NINDS NIH HHS NS039449NINDS NIH HHS R01 NS039449
6 · The paper itself

Abstract

Apurinic/apyrimidinic endonuclease 1 (Ape1/Ref-1) is a multifunctional protein critical for cellular survival. Its involvement in adaptive survival responses includes key roles in redox sensing, transcriptional regulation, and repair of DNA damage via the base excision repair (BER) pathway. Ape1 is abundant in most cell types and central in integrating the first BER step catalyzed by different DNA glycosylases. BER is the main process for removal of oxidative DNA lesions in postmitotic brain cells, and after ischemic brain injury preservation of Ape1 coincides with neuronal survival, while its loss has been associated with neuronal death. Here, we report that in cultured primary neurons, diminution of cellular ATP by either oligomycin or H(2)O(2) is accompanied by depletion of nuclear Ape1, while other BER proteins are unaffected and retain their nuclear localization under these conditions. Importantly, while H(2)O(2) induces γH2AX phosphorylation, indicative of chromatin rearrangements in response to DNA damage, oligomycin does not. Furthermore, despite comparable diminution of ATP content, H(2)O(2) and oligomycin differentially affect critical parameters of mitochondrial respiration that ultimately determine cellular ATP content. Taken together, our findings demonstrate that in neurons, nuclear compartmentalization of Ape1 depends on ATP and loss of nuclear Ape1 reflects disruption of neuronal energy homeostasis. Energy crisis is a hallmark of stroke and other ischemic/hypoxic brain injuries. In vivo studies have shown that Ape1 deficit precedes neuronal loss in injured brain regions. Thus, our findings bring to light the possibility that energy failure-induced Ape1 depletion triggers neuronal death in ischemic brain injuries.

Indexed as

Energy MetabolismAdenosine TriphosphateAnimalsCell NucleusCells, CulturedDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA DamageDNA Ligase ATPDNA LigasesDNA RepairHydrogen PeroxideMiceMice, Inbred C57BLMitochondriaMitochondrial Proton-Translocating ATPasesAdenosine TriphosphateApex1 protein, mouseDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA Ligase ATPDNA ligase III alpha protein, XenopusDNA LigasesHydrogen PeroxideMitochondrial Proton-Translocating ATPasesOligomycinsOxidantsPoly-ADP-Ribose Binding ProteinsXenopus ProteinsX-ray Repair Cross Complementing Protein 1

Identifiers

PMID22841870
PMCPMC3487712
OpenAlexW1989111051

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.