Evidence map›Paper›PMID 22840770›Full record

ArticleChemistry & biology2012

Arginine topology controls escape of minimally cationic proteins from early endosomes to the cytoplasm.

Jacob S Appelbaum, Jonathan R LaRochelle, Betsy A Smith, Daniel M Balkin, Justin M Holub, Alanna Schepartz

Abstract read
In one paragraph

Article in Chemistry & biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 168 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Hydrophilic α-Aryl-α-Diazoamides for Protein Esterification.Synlett : accounts and rapid communications in synthetic organic chemistry · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Nanoimmunotherapy: the smart trooper for cancer therapy.Exploration of targeted anti-tumor therapy · 2025
    Review
  15. Bismuth-Cyclized Cell-Penetrating Peptides.Molecular pharmaceutics · 2024
    Article
  16. Review
  17. Review
  18. Article
  19. Targeting and monitoring ovarian cancer invasion with an RNAi and peptide delivery system.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  20. Article

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jacob S AppelbaumDepartment of Cell Biology, Yale University School of Medicine, PO Box 208002, New Haven, CT 06520-8002, USA.
Jonathan R LaRochelle
Betsy A Smith
Daniel M Balkin
Justin M Holub
Alanna Schepartz
Yale University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007205 · NIGMS · YALE UNIVERSITY · PI KAZMIERCZAK, BARBARA I · 1985 to 2019
$42.9M
Predoc Training at the Interface Chemistry and BiologyT32GM067543 · NIGMS · YALE UNIVERSITY · PI CRAWFORD, JASON MICHAEL · 2003 to 2022
$7.4M
Foldamers: Novel Ligands for Diverse Protein SurfacesR01GM074756 · NIGMS · YALE UNIVERSITY · PI SCHEPARTZ, ALANNA · 2005 to 2013
$3.2M
A novel small-molecule approach to detect specifc peptide-MHC complexesF30HL094078 · NHLBI · YALE UNIVERSITY · PI APPELBAUM, JACOB · 2008 to 2010
$126k
NHLBI NIH HHS F30 HL094078NHLBI NIH HHS F30 HL 09407803NIGMS NIH HHS GM 74756NIGMS NIH HHS R01 GM074756NIGMS NIH HHS T32 GM007205NIGMS NIH HHS T32 GM067543NIGMS NIH HHS T32GM067543NIGMS NIH HHS TG T32GM07205
6 · The paper itself

Abstract

Proteins represent an expanding class of therapeutics, but their actions are limited primarily to extracellular targets because most peptidic molecules fail to enter cells. Here we identified two small proteins, miniature protein 5.3 and zinc finger module ZF5.3, that enter cells to reach the cytosol through rapid internalization and escape from Rab5+ endosomes. The trafficking pathway mapped for these molecules differs from that of Tat and Arg(8), which require transport beyond Rab5+ endosomes to gain cytosolic access. Our results suggest that the ability of 5.3 and ZF5.3 to escape from early endosomes is a unique feature and imply the existence of distinct signals, encodable within short sequences, that favor early versus late endosomal release. Identifying these signals and understanding their mechanistic basis will illustrate how cells control the movement of endocytic cargo and may allow researchers to engineer molecules to follow a desired delivery pathway for rapid cytosolic access.

Indexed as

ArginineCationsCytoplasmDNA-Binding ProteinsEndosomesHeLa CellsHumansProteinsProtein TransportZinc FingersArginineCationsDNA-Binding ProteinsProteinsZF5-3 protein, human

Identifiers

PMID22840770
PMCPMC3488872
OpenAlexW2040078811

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.