Evidence map›Paper›PMID 22840407›Full record

ArticleCell reports2012

An in vivo platform for rapid high-throughput antitubercular drug discovery.

Kevin Takaki, Christine L Cosma, Mark A Troll, Lalita Ramakrishnan

Open access · goldAbstract readEvaluation StudyValidation Study
In one paragraph

Article in Cell reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 103 citations in OpenAlex.

  1. Article
  2. Article
  3. Drug Repurposing: An Emerging Strategy inJournal of microbiology and biotechnology · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Animals in Respiratory Research.International journal of molecular sciences · 2024
    Review
  10. Article
  11. Article
  12. Antimicrobial agents and chemotherapy · 2023
    Article
  13. Article
  14. Antimicrobial Compounds from Microorganisms.Antibiotics (Basel, Switzerland) · 2022
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. CFTR Depletion Confers Hypersusceptibility toFrontiers in cellular and infection microbiology · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kevin TakakiDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA.
Christine L Cosma
Mark A Troll
Lalita Ramakrishnan
University of Washington · US

Funding

Variation in Human Innate ImmunityU54AI057141 · NIAID · UNIVERSITY OF WASHINGTON · PI MANOIL, COLIN · 2003 to 2013
$102.3M
GENETIC BASIS OF MYCOBACTERIAL INVASIONR01AI036396 · NIAID · UNIVERSITY OF WASHINGTON · PI RAMAKRISHNAN, LALITA · 1994 to 2014
$5.2M
Host Responses to Mycobacterium Infection in ZebrafishR01AI054503 · NIAID · UNIVERSITY OF WASHINGTON · PI LALITA RAMAKRISHNAN · 2003 to 2026
$4.4M
Host-Responses to Mycobacterium Infection in ZebrafishR37AI054503 · NIAID · UNIVERSITY OF WASHINGTON · PI RAMAKRISHNAN, LALITA · 2012 to 2021
$3.1M
Linking the behavior of individual host cells to their transcriptional signaturesDP1MH099901 · NIMH · UNIVERSITY OF WASHINGTON · PI RAMAKRISHNAN, LALITA · 2012 to 2014
$2.3M
NIAID NIH HHS R01 AI036396NIAID NIH HHS R01 AI054503NIAID NIH HHS R01 AI54503NIAID NIH HHS R37 AI054503NIAID NIH HHS U54 AI057141NIAID NIH HHS U54AI057141NIMH NIH HHS DP1 MH099901
6 · The paper itself

Abstract

Treatment of tuberculosis, like other infectious diseases, is increasingly hindered by the emergence of drug resistance. Drug discovery efforts would be facilitated by facile screening tools that incorporate the complexities of human disease. Mycobacterium marinum-infected zebrafish larvae recapitulate key aspects of tuberculosis pathogenesis and drug treatment. Here, we develop a model for rapid in vivo drug screening using fluorescence-based methods for serial quantitative assessment of drug efficacy and toxicity. We provide proof-of-concept that both traditional bacterial-targeting antitubercular drugs and newly identified host-targeting drugs would be discovered through the use of this model. We demonstrate the model's utility for the identification of synergistic combinations of antibacterial drugs and demonstrate synergy between bacterial- and host-targeting compounds. Thus, the platform can be used to identify new antibacterial agents and entirely new classes of drugs that thwart infection by targeting host pathways. The methods developed here should be widely applicable to small-molecule screens for other infectious and noninfectious diseases.

Indexed as

Animal HusbandryAnimalsAnti-Bacterial AgentsAntitubercular AgentsAutomation, LaboratoryCryoanesthesiaDrug DiscoveryDrug SynergismFluorometryHigh-Throughput Screening AssaysLarvaModels, BiologicalReproducibility of ResultsTime FactorsZebrafishAnti-Bacterial AgentsAntitubercular Agents

Identifiers

PMID22840407
PMCPMC3433401
OpenAlexW2168036009

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.