Evidence map›Paper›PMID 22837650›Full record

ReviewInternational journal of molecular sciences2012

State of the art in silico tools for the study of signaling pathways in cancer.

Vanessa Medina Villaamil, Guadalupe Aparicio Gallego, Isabel Santamarina Cainzos, Manuel Valladares-Ayerbes, Luis M Antón Aparicio

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Vanessa Medina VillaamilBiomedical Research Institute (INIBIC), CHU A Coruña, Xubias de Abaixo s/n, PC 15006, A Coruña, Spain.
Guadalupe Aparicio GallegoBiomedical Research Institute (INIBIC), CHU A Coruña, Xubias de Abaixo s/n, PC 15006, A Coruña, Spain.
Isabel Santamarina CainzosBiomedical Research Institute (INIBIC), CHU A Coruña, Xubias de Abaixo s/n, PC 15006, A Coruña, Spain.
Manuel Valladares-AyerbesBiomedical Research Institute (INIBIC), CHU A Coruña, Xubias de Abaixo s/n, PC 15006, A Coruña, Spain.
Luis M Antón AparicioUniversity of A Coruña (UDC), PC 15006, A Coruña, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the last several years, researchers have exhibited an intense interest in the evolutionarily conserved signaling pathways that have crucial roles during embryonic development. Interestingly, the malfunctioning of these signaling pathways leads to several human diseases, including cancer. The chemical and biophysical events that occur during cellular signaling, as well as the number of interactions within a signaling pathway, make these systems complex to study. In silico resources are tools used to aid the understanding of cellular signaling pathways. Systems approaches have provided a deeper knowledge of diverse biochemical processes, including individual metabolic pathways, signaling networks and genome-scale metabolic networks. In the future, these tools will be enormously valuable, if they continue to be developed in parallel with growing biological knowledge. In this study, an overview of the bioinformatics resources that are currently available for the analysis of biological networks is provided.

Indexed as

Signal TransductionAlgorithmsAnimalsComputational BiologyGenomeGenomicsHumansNeoplasmsProteomicsSoftwareSystems BiologyVascular Endothelial Growth Factor AVascular Endothelial Growth Factor Abioinformaticscancernetworkspathwayssystems biology

Identifiers

PMID22837650
PMCPMC3397482

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.