Evidence map›Paper›PMID 22837325›Full record

ArticleJournal of clinical microbiology2012

Real-time PCR for diagnosing Helicobacter pylori infection in patients with upper gastrointestinal bleeding: comparison with other classical diagnostic methods.

Jesús Saez, Sofía Belda, Miguel Santibáñez, Juan Carlos Rodríguez, Javier Sola-Vera, Antonio Galiana, Montserrat Ruiz-García, Alicia Brotons, Elena López-Girona, Eva Girona and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

  1. Non-invasive diagnostic tests for Helicobacter pylori infection.The Cochrane database of systematic reviews · 2018
    Pooled it
  2. Update on the pathogenesis and clinical management ofWorld journal of gastrointestinal pathophysiology · 2025
    Review
  3. Article
  4. International journal of molecular sciences · 2025
    Review
  5. Article
  6. New CagL Amino Acid Polymorphism Patterns ofMedicina (Kaunas, Lithuania) · 2022
    Article
  7. Review
  8. Rapid and Sensitive Assay ofFrontiers in microbiology · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Accuracy of theTherapeutic advances in gastroenterology · 2020
    Review
  13. Article
  14. Detection ofRSC advances · 2018
    Article
  15. Gastric Juice-Based Real-Time PCR for TailoredInternational journal of medical sciences · 2017
    Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jesús SaezS. Medicina Digestiva, Hospital General Universitario de Elche, Elche, Alicante, Spain.
Sofía Belda
Miguel Santibáñez
Juan Carlos Rodríguez
Javier Sola-Vera
Antonio Galiana
Montserrat Ruiz-García
Alicia Brotons
Elena López-Girona
Eva Girona
Carlos Sillero
Gloria Royo
Hospital General Universitario de Elche · ESInstituto de Investigación Marqués de Valdecilla · ESUniversitat de Miguel Hernández d'Elx · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to determine the diagnostic usefulness of quantification of the H. pylori genome in detection of infection in patients with upper gastrointestinal bleeding (UGB). A total of 158 consecutive patients with digestive disorders, 80 of whom had clinical presentation of UGB, were studied. The number of microorganisms was quantified using a real-time PCR system which amplifies the urease gene with an internal control for eliminating the false negatives. A biopsy sample from the antrum and corpus of each patient was processed. The rapid urease test, culture, histological study, stool antigen test, and breath test were done. The gold standard was a positive culture or positive results in at least two of the other techniques. When a positive result was defined as any number of microorganisms/human cell, the sensitivity of real-time PCR was greater in bleeding patients, especially in the gastric corpus: 68.4% (95% confidence interval [CI], 52.3 to 84.5%) in non-UGB patients versus 91.5% (95% CI, 79.6 to 97.6%) in UGB patients. When a positive result was defined as a number of microorganisms/human cell above the optimal value that maximizes the Youden index (>3.56 microorganisms/human cell in the antrum and >2.69 in the corpus), the sensitivity and specificity in UGB patients were over 80% in both antrum and corpus. Our findings suggest that some bleeding patients with infection caused by H. pylori may not be correctly diagnosed by classical methods, and such patients could benefit from the improved diagnosis provided by real-time PCR. However, the clinical significance of a small number of microorganisms in patients with negative results in classical tests should be evaluated.

Indexed as

AdultAgedBacterial ProteinsBacteriological TechniquesFemaleGastrointestinal HemorrhageHelicobacter InfectionsHelicobacter pyloriHumansMaleMiddle AgedMolecular Diagnostic TechniquesProspective StudiesReal-Time Polymerase Chain ReactionSensitivity and SpecificityUreaseBacterial ProteinsUrease

Identifiers

PMID22837325
PMCPMC3457453
OpenAlexW1977700604

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.