Evidence map›Paper›PMID 22837324›Full record

ArticleJournal of clinical microbiology2012

Modeling uncertainty in single-copy assays for HIV.

Rutao Luo, Michael J Piovoso, Ryan Zurakowski

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Modelling HIV-1 2-LTR dynamics following raltegravir intensification.Journal of the Royal Society, Interface · 2013
    Trial
  2. Review
  3. Article
  4. Article
  5. Optimal control modulation of HIV reservoir formation rate by antigen infusion.Proceedings of the ... IEEE Conference on Decision & Control. IEEE Conference on Decision & Control · 2019
    Article
  6. Article
  7. Implications of Measurement Assay Type in Design of HIV Experiments.Proceedings of the ... IEEE Conference on Decision & Control. IEEE Conference on Decision & Control · 2017
    Article
  8. Experiment Design for Early Molecular Events in HIV Infection.Proceedings of the ... American Control Conference. American Control Conference · 2017
    Article
  9. Order preservation of expected information content using Unscented Transform approximation of multivariate prior distributions in HIV 2-LTR experiment design.Proceedings of the ... IEEE Conference on Decision & Control. IEEE Conference on Decision & Control · 2016
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Rutao LuoDepartment of Electrical and Computer Engineering, University of Delaware, Newark, DE, USA.
Michael J Piovoso
Ryan Zurakowski

Funding

Analysis of Differential Resistance Emergence Risk for Differential Treatment AppR21AI078842 · NIAID · UNIVERSITY OF DELAWARE · PI ZURAKOWSKI, RYAN M · 2009 to 2010
$396k
NIAID NIH HHS R21 AI078842NIAID NIH HHS R21AI078842
6 · The paper itself

Abstract

We present a simple computational model of measurement accuracy for single-copy sensitivity assays (SCA) of HIV RNA that was developed from first principles. The model shows that the SCA is significantly right-skewed. Measured virus concentrations of 1 and 10 virions/ml had overlapping 95% confidence intervals and were statistically indistinguishable.

Indexed as

Computer SimulationGenotypeHIVHIV InfectionsHumansMicrobial Sensitivity Tests

Identifiers

PMID22837324
PMCPMC3457444

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.