Evidence map›Paper›PMID 22833564›Full record

ArticleMolecular biology of the cell2012

NESdb: a database of NES-containing CRM1 cargoes.

Darui Xu, Nick V Grishin, Yuh Min Chook

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 168 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. The CRM1-dependent NESVeterinary research · 2025
    Article
  11. Phase I Trial of Selinexor in Pediatric Recurrent/Refractory Solid and CNS Tumors (ADVL1414): A Children's Oncology Group Phase I Consortium Trial.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Therapeutic targeting of exportin-1 beyond nuclear export.Trends in pharmacological sciences · 2025
    Review
  17. Article
  18. Article
  19. Article
  20. Glucan fromJournal of Cancer · 2024
    Article

56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Darui XuDepartment of Pharmacology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX 75390, USA.
Nick V Grishin
Yuh Min Chook
The University of Texas Southwestern Medical Center · USHoward Hughes Medical Institute · US

Funding

Structures and Mechanisms of Nuclear Import and ExportR01GM069909 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI CHOOK, YUH MIN · 2004 to 2020
$5.8M
Computational methods for structural-functional studies of proteinsR01GM094575 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI GRISHIN, NICK V. · 2010 to 2017
$2.4M
Database and Prediction Algorithm for the Leucine-rich Nuclear Export SignalsF32GM093493 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI XU, DARUI · 2010 to 2011
$99k
Howard Hughes Medical InstituteNIGMS NIH HHS F32 GM093493NIGMS NIH HHS F32GM093493NIGMS NIH HHS R01 GM069909NIGMS NIH HHS R01-GM069909NIGMS NIH HHS R01 GM094575NIGMS NIH HHS R01-GM094575
6 · The paper itself

Abstract

The leucine-rich nuclear export signal (NES) is the only known class of targeting signal that directs macromolecules out of the cell nucleus. NESs are short stretches of 8-15 amino acids with regularly spaced hydrophobic residues that bind the export karyopherin CRM1. NES-containing proteins are involved in numerous cellular and disease processes. We compiled a database named NESdb that contains 221 NES-containing CRM1 cargoes that were manually curated from the published literature. Each NESdb entry is annotated with information about sequence and structure of both the NES and the cargo protein, as well as information about experimental evidence of NES-mapping and CRM1-mediated nuclear export. NESdb will be updated regularly and will serve as an important resource for nuclear export signals. NESdb is freely available to nonprofit organizations at http://prodata.swmed.edu/LRNes.

Indexed as

Databases, ProteinNuclear Export SignalsActive Transport, Cell NucleusAmino Acid SequenceAnimalsCell NucleusExportin 1 ProteinHumansInternetKaryopherinsMolecular Sequence DataProtein BindingProteinsReceptors, Cytoplasmic and NuclearExportin 1 ProteinKaryopherinsNuclear Export SignalsProteinsReceptors, Cytoplasmic and Nuclear

Identifiers

PMID22833564
PMCPMC3442414
OpenAlexW2114915170

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.