Evidence map›Paper›PMID 22829454›Full record

ArticleHuman mutation2012

ALX4 gain-of-function mutations in nonsyndromic craniosynostosis.

Garima Yagnik, Apar Ghuman, Sundon Kim, Christina G Stevens, Virginia Kimonis, Joan Stoler, Pedro A Sanchez-Lara, Jonathan A Bernstein, Cyril Naydenov, Hicham Drissi and 3 more

Abstract read
In one paragraph

Article in Human mutation, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Genetics versus environment in the pathophysiology of sagittal synostosis.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2026
    Pooled it
  2. Article
  3. Regulatory elements inGenetics in medicine open · 2024
    Article
  4. Article
  5. Transcriptomic Signatures of Single-Suture Craniosynostosis Phenotypes.International journal of molecular sciences · 2023
    Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Genetic advances in craniosynostosis.American journal of medical genetics. Part A · 2017
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. MAPK/ERK Signaling Pathway Analysis in Primary Osteoblasts From Patients With Nonsyndromic Sagittal Craniosynostosis.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2014
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 2 countries.

Garima YagnikSection of Genetics, Department of Pediatrics, University of California-Davis, Sacramento, CA 95817, USA.
Apar Ghuman
Sundon Kim
Christina G Stevens
Virginia Kimonis
Joan Stoler
Pedro A Sanchez-Lara
Jonathan A Bernstein
Cyril Naydenov
Hicham Drissi
Michael L Cunningham
Jinoh Kim
Simeon A Boyadjiev
University of California, Davis · USBoston Children's Hospital · USChildren's Hospital of Los Angeles · USMedical University of Sofia · BGSeattle Children's Hospital · USStanford University · USUConn Health · USUniversity of California, Irvine · US

Funding

ZINC AND CA EDTA THERAPY OF PLUMBISMM01RR000052 · NCRR · JOHNS HOPKINS UNIVERSITY · PI MARSH, LAURA · 1985 to 2007
$37.3M
SINGLE SUTURE CRANIOSYNOSTOSIS: CANDIDATE GENE AND PATHWAY DISCOVERYR01DE018227 · NIDCR · UNIVERSITY OF WASHINGTON · PI CUNNINGHAM, MICHAEL L · 2008 to 2017
$5.6M
NONSYNDROMIC CRANIOSYNOSTOSIS: PHENOTYPE/GENOTYPE STUDYR01DE016886 · NIDCR · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BOYADJIEV BOYD, SIMEON A, ROMITTI, PAUL A · 2006 to 2018
$5.5M
TGF BETA SIGNALING AND CRANIOFACIAL MORPHOGENESISR37DE012711 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHAI, YANG · 2009 to 2018
$4.3M
GENETIC EPIDEMIOLOGY OF CRANIOSYNOSTOSISK23DE000462 · NIDCR · JOHNS HOPKINS UNIVERSITY · PI BOYADJIEV BOYD, SIMEON A · 2000 to 2004
$623k
Candidate Gene Analysis/Nonsyndromic CraniosynostosisR03DE016342 · NIDCR · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BOYADJIEV BOYD, SIMEON A · 2005 to 2006
$162k
NCRR NIH HHS M01 RR000052NCRR NIH HHS M01-RR00052NICHD NIH HHS K12-HD05954NIDCR NIH HHS 3R37DE012711-13S1NIDCR NIH HHS K23 DE000462NIDCR NIH HHS K23 DE00462NIDCR NIH HHS R01 DE016886NIDCR NIH HHS R01 DE018227NIDCR NIH HHS R03 DE016342
6 · The paper itself

Abstract

Craniosynostosis is the early fusion of one or more sutures of the infant skull and is a common defect occurring in approximately 1 of every 2,500 live births. Nonsyndromic craniosynostosis (NSC) accounts for approximately 80% of all cases and is thought to have strong genetic determinants that are yet to be identified. ALX4 is a homeodomain transcription factor with known involvement in osteoblast regulation. By direct sequencing of the ALX4 coding region in sagittal or sagittal-suture-involved nonsyndromic craniosynostosis probands, we identified novel, nonsynonymous, familial variants in three of 203 individuals with NSC. Using dual-luciferase assay we show that two of these variants (V7F and K211E) confer a significant gain-of-function effect on ALX4. Our results suggest that ALX4 variants may have an impact on the genetic etiology of NSC.

Indexed as

Mutation, MissenseAmino Acid SequenceBase SequenceConserved SequenceCraniosynostosesDNA-Binding ProteinsGene FrequencyGenetic Association StudiesHumansPolymorphism, Single NucleotideSequence Analysis, DNATranscription FactorsALX4 protein, humanDNA-Binding ProteinsTranscription Factors

Identifiers

PMID22829454
PMCPMC3495992
OpenAlexW2160667120

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.