Evidence map›Paper›PMID 22828792›Full record

ArticleWorld journal of microbiology & biotechnology2012

A novel xylan degrading β-D-xylosidase: purification and biochemical characterization.

Michele Michelin, Simone C Peixoto-Nogueira, Tony M Silva, João A Jorge, Héctor F Terenzi, José A Teixeira, Maria de Lourdes T M Polizeli

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in World journal of microbiology & biotechnology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Screening of thermotolerant and thermophilic fungi aiming β-xylosidase and arabinanase production.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Michele MichelinDepartamento de Biologia, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, Avenida Bandeirantes 3900, Ribeirão Preto, SP 14040-901, Brazil.
Simone C Peixoto-Nogueira
Tony M Silva
João A Jorge
Héctor F Terenzi
José A Teixeira
Maria de Lourdes T M Polizeli
Universidade de Ribeirão Preto · BRUniversidade de São Paulo · BRUniversity of Minho · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aspergillus ochraceus, a thermotolerant fungus isolated in Brazil from decomposing materials, produced an extracellular β-xylosidase that was purified using DEAE-cellulose ion exchange chromatography, Sephadex G-100 and Biogel P-60 gel filtration. β-xylosidase is a glycoprotein (39 % carbohydrate content) and has a molecular mass of 137 kDa by SDS-PAGE, with optimal temperature and pH at 70 °C and 3.0-5.5, respectively. β-xylosidase was stable in acidic pH (3.0-6.0) and 70 °C for 1 h. The enzyme was activated by 5 mM MnCl₂ (28 %) and MgCl₂ (20 %) salts. The β-xylosidase produced by A. ochraceus preferentially hydrolyzed p-nitrophenyl-β-D-xylopyranoside, exhibiting apparent K(m) and V(max) values of 0.66 mM and 39 U (mg protein)⁻¹ respectively, and to a lesser extent p-nitrophenyl-β-D-glucopyranoside. The enzyme was able to hydrolyze xylan from different sources, suggesting a novel β-D-xylosidase that degrades xylan. HPLC analysis revealed xylans of different compositions which allowed explaining the differences in specificity observed by β-xylosidase. TLC confirmed the capacity of the enzyme in hydrolyzing xylan and larger xylo-oligosaccharides, as xylopentaose.

Indexed as

Aspergillus ochraceusBrazilChloridesChromatography, GelChromatography, Ion ExchangeEnvironmental MicrobiologyEnzyme ActivatorsEnzyme StabilityHydrogen-Ion ConcentrationKineticsMagnesium ChlorideManganese CompoundsMolecular WeightSubstrate SpecificityTemperatureXylansChloridesEnzyme Activatorsexo-1,4-beta-D-xylosidaseMagnesium Chloridemanganese chlorideManganese CompoundsXylansXylosidases

Identifiers

PMID22828792
OpenAlexW2050978038

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.