Evidence map›Paper›PMID 22828329›Full record

ArticleBiophysical journal2012

Supramolecular structure of membrane-associated polypeptides by combining solid-state NMR and molecular dynamics simulations.

Markus Weingarth, Christian Ader, Adrien S J Melquiond, Deepak Nand, Olaf Pongs, Stefan Becker, Alexandre M J J Bonvin, Marc Baldus

Abstract read
In one paragraph

Article in Biophysical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Solid-state NMR spectroscopy reveals unique properties ofCell surface (Amsterdam, Netherlands) · 2025
    Article
  2. Review
  3. Article
  4. New applications of solid-state NMR in structural biology.Emerging topics in life sciences · 2018
    Article
  5. Article
  6. Importance of lipid-pore loop interface for potassium channel structure and function.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Markus WeingarthBijvoet Center for Biomolecular Research, Utrecht University, Utrecht, The Netherlands.
Christian Ader
Adrien S J Melquiond
Deepak Nand
Olaf Pongs
Stefan Becker
Alexandre M J J Bonvin
Marc Baldus

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Elemental biological functions such as molecular signal transduction are determined by the dynamic interplay between polypeptides and the membrane environment. Determining such supramolecular arrangements poses a significant challenge for classical structural biology methods. We introduce an iterative approach that combines magic-angle spinning solid-state NMR spectroscopy and atomistic molecular dynamics simulations for the determination of the structure and topology of membrane-bound systems with a resolution and level of accuracy difficult to obtain by either method alone. Our study focuses on the Shaker B ball peptide that is representative for rapid N-type inactivating domains of voltage-gated K(+) channels, associated with negatively charged lipid bilayers.

Indexed as

Molecular Dynamics SimulationAmino Acid SequenceAnimalsIntracellular Signaling Peptides and ProteinsLipid BilayersMagnetic Resonance SpectroscopyMolecular Sequence DataPeptidesPotassium Channels, Voltage-GatedIntracellular Signaling Peptides and ProteinsLipid BilayersPeptidesPotassium Channels, Voltage-GatedShaker B inactivating peptide

Identifiers

PMID22828329
PMCPMC3388208

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.