Evidence map›Paper›PMID 22827601›Full record

ArticleMolecular pharmaceutics2012

The role of individual carbohydrate-binding sites in the function of the potent anti-HIV lectin griffithsin.

Jie Xue, Yongguang Gao, Bart Hoorelbeke, Ioannis Kagiampakis, Bo Zhao, Borries Demeler, Jan Balzarini, Patricia J Liwang

Open access · greenAbstract read
In one paragraph

Article in Molecular pharmaceutics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. ACS chemical biology · 2022
    Article
  5. Lectins and lectibodies: potential promising antiviral agents.Cellular & molecular biology letters · 2022
    Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Novel Antiretroviral Structures from Marine Organisms.Molecules (Basel, Switzerland) · 2019
    Review
  15. Review
  16. Structure-function characterization of an insecticidal protein GNIP1Aa, a member of an MACPF and β-tripod families.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Jie XueUniversity of California Merced, 5200 North Lake Road, Merced, California 95343, United States.
Yongguang Gao
Bart Hoorelbeke
Ioannis Kagiampakis
Bo Zhao
Borries Demeler
Jan Balzarini
Patricia J Liwang
University of California, Merced · USKU Leuven · BERega Institute for Medical Research · BEThe University of Texas Health Science Center at San Antonio · US

Funding

UltraScan Software Maintenance and DevelopmentR01RR022200 · NCRR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI DEMELER, BORRIES · 2007 to 2010
$1.7M
Center of Excellence on Health Disparities in the Ethnic and Rural UnderservedP20MD005049 · NIMHD · UNIVERSITY OF CALIFORNIA, MERCED · PI WALLANDER, JAN L · 2009 to 2010
$1.3M
Combinations of entry inhibitors as anti HIV-1 microbicidesR21AI079777 · NIAID · UNIVERSITY OF CALIFORNIA, MERCED · PI LIWANG, PATRICIA J · 2008 to 2009
$407k
NCRR NIH HHS R01 RR022200NCRR NIH HHS RR022200NIAID NIH HHS R21 AI079777NIMHD NIH HHS 1P20MD005049-01NIMHD NIH HHS P20 MD005049
6 · The paper itself

Abstract

Griffithsin (GRFT) is a lectin that has been shown to inhibit HIV infection by binding to high mannose glycan structures on the surface of gp120, and it is among the most potent HIV entry inhibitors reported so far. However, important biochemical details on the antiviral mechanism of GRFT action remain unexplored. In order to understand the role of the three individual carbohydrate-binding sites (CBS) in GRFT, mutations were made at each site (D30A, D70A, and D112A), and the resulting mutants were investigated. NMR studies revealed that each GRFT variant was folded but showed significant peak movement on the carbohydrate-binding face of the protein. The wild-type and each point mutant protein appeared as tight dimers with a K(d) below 4.2 μM. Mutation of any individual CBS on GRFT reduced binding of the protein to mannose, and ELISA assays revealed a partial loss of ability of each GRFT point mutant to bind gp120, with a near-complete loss of binding by the triple mutant D30A/D70A/D112A GRFT. A more quantitative surface plasmon resonance (SPR) examination showed a rather small loss of binding to gp120 for the individual GRFT point mutants (K(D): 123 to 245 pM range versus 73 pM for wild-type GRFT), but dramatic loss of the triple mutant to bind gp120 derived from R5 and X4 strains (K(D) > 12 nM). In contrast to the 2- to 3-fold loss of binding to gp120, the single CBS point mutants of GRFT were significantly less able to inhibit viral infection, exhibiting a 26- to 1900-fold loss of potency, while the triple mutant was at least 875-fold less effective against HIV-1 infection. The disparity between HIV-1 gp120 binding ability and HIV inhibitory potency for these GRFT variants indicates that gp120 binding and virus neutralization do not necessarily correlate, and suggests a mechanism that is not based on simple gp120 binding.

Indexed as

Anti-HIV AgentsBinding SitesCarbohydratesHIV-1HIV Envelope Protein gp120HIV InfectionsMagnetic Resonance SpectroscopyMannoseModels, MolecularMutationPlant LectinsAnti-HIV AgentsCarbohydratesgriffithsin protein, GriffithsiaHIV Envelope Protein gp120MannosePlant Lectins

Identifiers

PMID22827601
PMCPMC3474606
OpenAlexW2095575068

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.