Evidence map›Paper›PMID 22827542›Full record

ArticleMolecular plant pathology2012

Degradation of aromatic compounds through the β-ketoadipate pathway is required for pathogenicity of the tomato wilt pathogen Fusarium oxysporum f. sp. lycopersici.

Caroline B Michielse, Linda Reijnen, Chantal Olivain, Claude Alabouvette, Martijn Rep

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Function and regulation ofApplied and environmental microbiology · 2025
    Article
  4. Article
  5. The Ubiquitous Wilt-Inducing PathogenPathogens (Basel, Switzerland) · 2024
    Review
  6. Article
  7. Article
  8. Lower Funneling Pathways inFrontiers in microbiology · 2021
    Article
  9. Bacterial Community Selection ofFrontiers in microbiology · 2020
    Article
  10. Review
  11. The Plant Pathogenic BacteriumFrontiers in microbiology · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Caroline B MichielsePlant Pathology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, the Netherlands. c.b.michielse@uni-muenster.de
Linda Reijnen
Chantal Olivain
Claude Alabouvette
Martijn Rep
Amsterdam University of Applied Sciences · NLUniversité de Bourgogne · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant roots react to pathogen attack by the activation of general and systemic resistance, including the lignification of cell walls and increased release of phenolic compounds in root exudate. Some fungi have the capacity to degrade lignin using ligninolytic extracellular peroxidases and laccases. Aromatic lignin breakdown products are further catabolized via the β-ketoadipate pathway. In this study, we investigated the role of 3-carboxy-cis,cis-muconate lactonizing enzyme (CMLE), an enzyme of the β-ketoadipate pathway, in the pathogenicity of Fusarium oxysporum f. sp. lycopersici towards its host, tomato. As expected, the cmle deletion mutant cannot catabolize phenolic compounds known to be degraded via the β-ketoadipate pathway. In addition, the mutant is impaired in root invasion and is nonpathogenic, even though it shows normal superficial root colonization. We hypothesize that the β-ketoadipate pathway in plant-pathogenic, soil-borne fungi is necessary to degrade phenolic compounds in root exudate and/or inside roots in order to establish disease.

Indexed as

Biosynthetic PathwaysAdipatesColony Count, MicrobialFlaxFusariumGene DeletionHydrocarbons, AromaticIntramolecular LyasesPest Control, BiologicalPlant DiseasesPlant RootsSolanum lycopersicumSpores, Fungal3-carboxy-cis-cis-muconate cyclase3-oxoadipic acidAdipatesHydrocarbons, AromaticIntramolecular Lyases

Identifiers

PMID22827542
PMCPMC6638894
OpenAlexW2148973023

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.