Evidence map›Paper›PMID 22826500›Full record

ArticleNucleic acids research2012

A NAC transcription factor and SNI1 cooperatively suppress basal pathogen resistance in Arabidopsis thaliana.

Ho Soo Kim, Hyeong Cheol Park, Kyung Eun Kim, Mi Soon Jung, Hay Ju Han, Sun Ho Kim, Young Sang Kwon, Sunghwa Bahk, Jonguk An, Dong Won Bae and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
8.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 60 citations in OpenAlex.

  1. Pooled it
  2. Article
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  6. Review
  7. Article
  8. Article
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  11. Article
  12. A New Species inFrontiers in microbiology · 2022
    Article
  13. Pathogens (Basel, Switzerland) · 2021
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Time-evolving genetic networks reveal a NAC troika that negatively regulates leaf senescence inProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Ho Soo KimDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Korea.
Hyeong Cheol Park
Kyung Eun Kim
Mi Soon Jung
Hay Ju Han
Sun Ho Kim
Young Sang Kwon
Sunghwa Bahk
Jonguk An
Dong Won Bae
Dae-Jin Yun
Sang-Soo Kwak
Woo Sik Chung
Gyeongsang National University · KRKorea Research Institute of Bioscience and Biotechnology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcriptional repression of pathogen defense-related genes is essential for plant growth and development. Several proteins are known to be involved in the transcriptional regulation of plant defense responses. However, mechanisms by which expression of defense-related genes are regulated by repressor proteins are poorly characterized. Here, we describe the in planta function of CBNAC, a calmodulin-regulated NAC transcriptional repressor in Arabidopsis. A T-DNA insertional mutant (cbnac1) displayed enhanced resistance to a virulent strain of the bacterial pathogen Pseudomonas syringae DC3000 (PstDC3000), whereas resistance was reduced in transgenic CBNAC overexpression lines. The observed changes in disease resistance were correlated with alterations in pathogenesis-related protein 1 (PR1) gene expression. CBNAC bound directly to the PR1 promoter. SNI1 (suppressor of nonexpressor of PR genes1, inducible 1) was identified as a CBNAC-binding protein. Basal resistance to PstDC3000 and derepression of PR1 expression was greater in the cbnac1 sni1 double mutant than in either cbnac1 or sni1 mutants. SNI1 enhanced binding of CBNAC to its cognate PR1 promoter element. CBNAC and SNI1 are hypothesized to work as repressor proteins in the cooperative suppression of plant basal defense.

Indexed as

ArabidopsisArabidopsis ProteinsDisease ResistanceDNAGene Expression Regulation, PlantNuclear ProteinsPlant DiseasesPromoter Regions, GeneticPseudomonas syringaeRepressor ProteinsRNA, MessengerSalicylic AcidArabidopsis ProteinsCBNAC protein, ArabidopsisDNANuclear ProteinsRepressor ProteinsRNA, MessengerSalicylic AcidSNI1 protein, Arabidopsis

Identifiers

PMID22826500
PMCPMC3467076
OpenAlexW2098476552

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.