Evidence map›Paper›PMID 22825848›Full record

ArticleThe Journal of biological chemistry2012

The AT-rich DNA-binding protein SATB2 promotes expression and physical association of human (G)γ- and (A)γ-globin genes.

Li-Quan Zhou, Jie Wu, Wen-Tian Wang, Wei Yu, Guang-Nian Zhao, Peng Zhang, Jian Xiong, Man Li, Zheng Xue, Xing Wang and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  5. Regional specific differentiation of integumentary organs: SATB2 is involved in α- and β-keratin gene cluster switching in the chicken.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Article
  6. Transcriptional regulation ofFrontiers in cell and developmental biology · 2022
    Article
  7. Article
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  11. Review
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  14. Article
  15. Clinical and molecular consequences of disease-associated de novo mutations in SATB2.Genetics in medicine : official journal of the American College of Medical Genetics · 2017
    Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Li-Quan ZhouNational Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100005, PR China.
Jie Wu
Wen-Tian Wang
Wei Yu
Guang-Nian Zhao
Peng Zhang
Jian Xiong
Man Li
Zheng Xue
Xing Wang
Xue-Min Xie
Zhi-Chen Guo
Xiang Lv
De-Pei Liu
Chinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Matrix attachment region (MAR)-binding protein (MARBP) has profound influence on gene transcriptional control by tethering genes to the nuclear scaffold. MARBP SATB2 is recently known as a versatile regulator functioning in the differentiation of multiple cell types including embryonic stem cells, osteoblasts and immunocytes. Roles of SATB2 in erythroid cells and its working mechanism in orchestrating target gene expression are largely unexplored. We show here that SATB2 is expressed in erythroid cells and activates γ-globin genes by binding to MARs in their promoters and recruiting histone acetylase PCAF. Further analysis in higher-order chromatin structure shows that SATB2 affects physical proximity of human (G)γ- and (A)γ-globin promoters via self-association. We also found that SATB2 interacts with SATB1, which specifically activates ε-globin gene expression. Our results establish SATB2 as a novel γ-globin gene regulator and provide a glimpse of the differential and cooperative roles of SATB family proteins in modulating clustered genes transcription and mediating higher-order chromatin structures.

Indexed as

AnimalsEmbryonic Stem CellsErythroid Cellsgamma-GlobinsGene Expression RegulationHumansK562 CellsMatrix Attachment Region Binding ProteinsMatrix Attachment RegionsMiceMultigene FamilyTranscription FactorsTranscription, Geneticgamma-GlobinsMatrix Attachment Region Binding ProteinsSATB1 protein, humanSatb1 protein, mouseSATB2 protein, humanSATB2 protein, mouseTranscription Factors

Identifiers

PMID22825848
PMCPMC3436309
OpenAlexW2032521343

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.