Evidence map›Paper›PMID 22823543›Full record

ArticleBMC genomics2012

Burkholderia pseudomallei transcriptional adaptation in macrophages.

Sylvia Chieng, Laura Carreto, Sheila Nathan

Abstract read
In one paragraph

Article in BMC genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Metabolomic profiling ofmSystems · 2025
    Article
  2. Article
  3. mSphere · 2024
    Article
  4. Transcriptional landscape ofMicrobial genomics · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. An Evolutionary Arms Race BetweenFrontiers in microbiology · 2020
    Review
  11. Article
  12. Identification ofFrontiers in microbiology · 2020
    Article
  13. Article
  14. MarR Family Transcription Factors fromMicrobiology and molecular biology reviews : MMBR · 2019
    Review
  15. Review
  16. BioMed research international · 2018
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sylvia ChiengSchool of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, Bangi, 43600, Malaysia.
Laura Carreto
Sheila Nathan

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBurkholderia pseudomallei is a facultative intracellular pathogen of phagocytic and non-phagocytic cells. How the bacterium interacts with host macrophage cells is still not well understood and is critical to appreciate the strategies used by this bacterium to survive and how intracellular survival leads to disease manifestation.

resultsHere we report the expression profile of intracellular B. pseudomallei following infection of human macrophage-like U937 cells. During intracellular growth over the 6 h infection period, approximately 22 % of the B. pseudomallei genome showed significant transcriptional adaptation. B. pseudomallei adapted rapidly to the intracellular environment by down-regulating numerous genes involved in metabolism, cell envelope, motility, replication, amino acid and ion transport system and regulatory function pathways. Reduced expression in catabolic and housekeeping genes suggested lower energy requirement and growth arrest during macrophage infection, while expression of genes encoding anaerobic metabolism functions were up regulated. However, whilst the type VI secretion system was up regulated, expression of many known virulence factors was not significantly modulated over the 6hours of infection.

conclusionsThe transcriptome profile described here provides the first comprehensive view of how B. pseudomallei survives within host cells and will help identify potential virulence factors and proteins that are important for the survival and growth of B. pseudomallei within human cells.

Indexed as

Adaptation, PhysiologicalBacterial ProteinsBurkholderia pseudomalleiDown-RegulationGene Expression ProfilingHumansMacrophagesOligonucleotide Array Sequence AnalysisRNA, BacterialSigma FactorTime FactorsTranscriptomeU937 CellsUp-RegulationBacterial ProteinsRNA, BacterialSigma Factorsigma factor KatF protein, Bacteria

Identifiers

PMID22823543
PMCPMC3418162

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.